Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1946 98.7 1e-15 >seq1946 Length=2437 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 71421 ACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGC 71480 ||| ||||| |||| |||| || || ||||| || || || || | | || || Sbjct 1057 ACTAGCCTCGCATGCAGCATAGTATATACACTCGAAGATATTTTTGTTTAATTGTTTAGC 1116 Query 71481 TTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCC 71540 ||| | |||||| ||| | | |||| ||| || ||||||||||| || || Sbjct 1117 TTCTTGTGAATCAAAAGGAAGACGAAGAAGAAGAAAACAATCAGCTAATCCTTGTACACC 1176 Query 71541 AATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATT 71600 ||||| |||||||| ||| | |||||| | ||| || ||| | |||||||||||||| Sbjct 1177 TATACCTATAGGTCTATGTTTTTTATTACTATATTCTGCCTCTTGTATAGGATAATAATT 1236 Query 71601 AATATCTATAATTTTATTGAGATT 71624 |||| ||||| ||||| ||||| Sbjct 1237 TTTATCAATAATATTATTAAGATT 1260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671109300748640