Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq2330 82.4 8e-11 >seq2330 Length=2393 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016 ||| |||| ||||||| || ||||||| ||||| || || || |||||||||||| Sbjct 238 GCCACCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGA 179 Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | || || || || || || || || || | || ||||| |||||||| ||||| Sbjct 178 AAGCGTCCTGCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGGAGG 119 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || || || || || ||| || || | | || | ||| || | ||||| || Sbjct 118 AATACCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATCGTATCTGATGGTTCGAC 59 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || | ||| | ||||| || |||| || || ||||| || ||||| Sbjct 58 ATCCAAAGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506991812508480