Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq3187 84.2 2e-11 >seq3187 Length=81671 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 18851 TCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAA 18910 ||||| ||||||||||| || | | ||| || |||| || ||||| || || || | Sbjct 67563 TCCTTCTGAATATTGTAGTCGGAGAGAGTTCTGCCGTCATCAAGCTGCTTTCCAGCGAAG 67504 Query 18911 ATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGG 18970 ||||| | |||||| || || | ||||||||||| ||| ||| || || | Sbjct 67503 ATAAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTGAATCTTCGCCTTCACATTT 67444 Query 18971 CCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACA 19030 ||| ||| ||| ||||||| || | |||||| || || || || | || || ||| Sbjct 67443 TCGATAGTGTCGGAAGGCTCCACATCAAGGGTAATAGTCTTCCCCGTCAGCGTCTTCACA 67384 Query 19031 AAAATTTGCATTTT 19044 ||||| ||||| || Sbjct 67383 AAAATCTGCATCTT 67370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414554792512216