Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1946 113 6e-20 >seq1946 Length=2437 Score = 113 bits (124), Expect = 6e-20 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 62602 CAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTAT 62661 |||| |||| ||| ||||| ||||| | || || || |||||||| || || | Sbjct 1044 CAGCAAGTTGCATACTAGCCTCGCATGCAGCATAGTATATACACTCGAAGATATTTTTGT 1103 Query 62662 TTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTA 62721 ||| | || ||||| | |||||| ||| | | |||| ||| || |||| Sbjct 1104 TTAATTGTTTAGCTTCTTGTGAATCAAAAGGAAGACGAAGAAGAAGAAAACAATCAGCTA 1163 Query 62722 ATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAA 62781 ||||||| ||||| ||||| |||||||||||| | |||||| ||| || ||| | | Sbjct 1164 ATCCTTGTACACCTATACCTATAGGTCTATGTTTTTTATTACTATATTCTGCCTCTTGTA 1223 Query 62782 TAGGATAATAATTAATATCTATAATTTTATTGAGATT 62818 ||||||||||||| |||| ||||| ||||| ||||| Sbjct 1224 TAGGATAATAATTTTTATCAATAATATTATTAAGATT 1260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622919447702240