Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2330 131 2e-25 seq3187 84.2 2e-11 >seq2330 Length=2393 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 |||| || | |||||||||||| ||||| | ||| |||||||| ||||||||||||||| Sbjct 467 AGCCGCCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGG 408 Query 131066 TCATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGA 131124 | || | || | ||||| ||||||||||| ||| | || | ||||||||| || ||| Sbjct 407 AAAGCGTCCTGCCA-TCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGGA 349 Query 131125 GGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCG 131184 || || || || || || || ||| ||| | | ||| | |||||| | | ||| Sbjct 348 GGAATACCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATAGTATCTGATGGCTCA 289 Query 131185 ATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 | || | || | ||| || || || ||||| || ||||| ||||||||| Sbjct 288 ACATCCAAAGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCATG 238 Score = 129 bits (142), Expect = 6e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | |||||||||||| ||||| | ||| |||||||| ||||||||||||||| Sbjct 238 GCCACCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGA 179 Query 131067 CATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | || | || | ||||| ||||||||||| ||| | || | ||||||||| || |||| Sbjct 178 AAGCGTCCTGCCA-TCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGGAG 120 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 | || || || || || || ||| ||| | | ||| | ||||| | | |||| Sbjct 119 GAATACCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATCGTATCTGATGGTTCGA 60 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || ||||| || ||||| ||||||||| Sbjct 59 CATCCAAAGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCATG 10 >seq3187 Length=81671 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 131044 TCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAG 131103 ||||| ||||| ||||| ||| | || | ||| || |||||||| || ||| || Sbjct 67563 TCCTTCTGAATATTGTAGTCGGAGAGAGTTCTGCCGTCATCAAGCTGCTTTCCAGCGAAG 67504 Query 131104 ATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC 131163 || | ||||||||||| ||||| || || |||||||| || ||| ||| | | Sbjct 67503 ATAAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTGAATCTTCGCCTTCACATTT 67444 Query 131164 TCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACG 131223 || | ||| |||| | ||| | || | ||||| || || || || || || || || Sbjct 67443 TCGATAGTGTCGGAAGGCTCCACATCAAGGGTAATAGTCTTCCCCGTCAGCGTCTTCACA 67384 Query 131224 AAAATCTGCAT 131234 ||||||||||| Sbjct 67383 AAAATCTGCAT 67373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471991771829760