Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3187 87.8 2e-12 >seq3187 Length=81671 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || | || || | || |||||| | || Sbjct 67373 ATGCAGATTTTTGTGAAGACGCTGACGGGGAAGACTATTACCCTTGATGTGGAGCCTTCC 67432 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| |||| || || | ||| |||||||| || ||||| || ||||| Sbjct 67433 GACACTATCGAAAATGTGAAGGCGAAGATTCA-GGACAAAGAGGGTATTCCTCCAGACCA 67491 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| |||| || || || || || | || || | | ||| | ||| ||||| Sbjct 67492 GCAGCGCCTTATCTTCGCTGGAAAGCAGCTTGATGACGGCAGAACTCTCTCCGACTACAA 67551 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||| || ||| ||| || || || || Sbjct 67552 TATTCAGAAGGAAAGCACTCTTCACTTGGT 67581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433309177856660