Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq499 96.9 7e-15 >seq499 Length=27563 Score = 96.9 bits (106), Expect = 7e-15 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 142058 TGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 7839 TGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 7898 Query 142118 C 142118 | Sbjct 7899 C 7899 Score = 96.9 bits (106), Expect = 7e-15 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 142058 TGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 8188 TGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 8247 Query 142118 C 142118 | Sbjct 8248 C 8248 Score = 96.9 bits (106), Expect = 7e-15 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 142058 TGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 8592 TGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 8651 Query 142118 C 142118 | Sbjct 8652 C 8652 Score = 93.3 bits (102), Expect = 9e-14 Identities = 57/61 (93%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 142058 TGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 ||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 8015 TGTAGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 8074 Query 142118 C 142118 | Sbjct 8075 C 8075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027789865117324