Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq3187 82.4 5e-11 >seq3187 Length=81671 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 || ||||| || ||| | || || | ||||| || || |||||| | || ||| | Sbjct 67370 AAGATGCAGATTTTTGTGAAGACGCTGACGGGGAAGACTATTACCCTTGATGTGGAGCCT 67429 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 | || || | | || | ||| || ||| || ||||||||| | ||| | || Sbjct 67430 TCCGACACTATCGAAAATGTGAAGGCGAAGATTCAGGACAAAGAGGGTATTCCTCCAGAC 67489 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || ||| | |||||||| ||||| || || || || || | |||| | |||| ||| Sbjct 67490 CAGCAGCGCCTTATCTTCGCTGGAAAGCAGCTTGATGACGGCAGAACTCTCTCCGACTAC 67549 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTA 22043 ||||||||||||||| |||||||| ||||| Sbjct 67550 AATATTCAGAAGGAAAGCACTCTTCACTTGGTA 67582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358109244401656