Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06]
3,564 sequences; 45,975,062 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq3187 95.1 1e-14
seq2330 86.0 5e-12
>seq3187
Length=81671
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 114191 TTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTA 114250
||| || ||||| ||||| ||| | ||| | || ||||| || || |||||| |
Sbjct 67564 TTCCTTCTGAATATTGTAGTCGGAGAGAGTTCTGCCGTCATCAAGCTGCTTTCCAGCGAA 67505
Query 114251 GATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTG 114310
||| || ||||| ||||| |||||||| || |||||||| |||||| || | |
Sbjct 67504 GATAAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTGTCCTGAATCTTCGCCTTCACATT 67445
Query 114311 TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370
||| | ||||||| | || || || | ||| | || || || ||||| || || ||
Sbjct 67444 TTCGATAGTGTCGGAAGGCTCCACATCAAGGGTAATAGTCTTCCCCGTCAGCGTCTTCAC 67385
Query 114371 AAAAATCTGCAT 114382
||||||||||||
Sbjct 67384 AAAAATCTGCAT 67373
>seq2330
Length=2393
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233
|| ||||| | ||||| || || ||||||||||||||| | || | ||| ||
Sbjct 219 ACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAAAGCGTCCTGCCATCCTCC 160
Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293
|| || || || ||| | ||||||||||| || || |||||||| || || || || |
Sbjct 159 AGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGGAGGAATACCCTCCTTATCCTGA 100
Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353
||||| || | | || | || || | | |||||| |||| || | || ||
Sbjct 99 ATCTTCGCCTTCACATTCTCGATCGTATCTGATGGTTCGACATCCAAAGTGATGGTCTTT 40
Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| |||||||| || || || |||||||||
Sbjct 39 CCAGTCAGAGTCTTCACGAAGATCTGCATG 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420116150937168
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |