Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq2330 89.7 4e-13 >seq2330 Length=2393 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/115 (79%), Gaps = 4/115 (3%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||||| |||||||||| |||||| || ||||||||||||||||||||| | Sbjct 237 CCACCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATC-GGA 179 Query 33961 AATTGTC--GCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || ||| || | || |||| ||||||||||| || || || ||||||||||| Sbjct 178 AAGCGTCCTGC-CATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATC 125 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/115 (79%), Gaps = 4/115 (3%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || ||||||| |||||||||| |||||| || ||||||||||||||||||||| | Sbjct 465 CCGCCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATC-GGA 407 Query 33961 AATTGTC--GCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 || ||| || | || |||| ||||||||||| || || || ||||||||||| Sbjct 406 AAGCGTCCTGC-CATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATC 353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397045153098328