Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq3187 113 5e-20 >seq3187 Length=81671 Score = 113 bits (124), Expect = 5e-20 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||||| ||||| ||||||||||| || | ||||| | ||||||| Sbjct 67581 ACCAAGTGAAGAGTGCTTTCCTTCTGAATATTGTAGTCGGAGAGAGTTCTGCCGTCATCA 67522 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| |||||||| || || ||||||||||| | || | | ||| |||||| || Sbjct 67521 AGCTGCTTTCCAGCGAAGATAAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTGTCC-TG 67463 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178 | | || | || | | | | |||||| | |||||||| | || || || || Sbjct 67462 AATCTTCGCCTTCACATTTTCGATAGTGTCGGAAGGCTCCACATCAAGGGTAATAGTCTT 67403 Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCATTTTC 42212 ||||| |||||||| ||||| || ||||| ||| Sbjct 67402 CCCCGTCAGCGTCTTCACAAAAATCTGCATCTTC 67369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543188599869760