Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06]
3,564 sequences; 45,975,062 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq2330 96.9 3e-15
seq3187 87.8 2e-12
>seq2330
Length=2393
Score = 96.9 bits (106), Expect = 3e-15
Identities = 165/234 (71%), Gaps = 4/234 (2%)
Strand=Plus/Minus
Query 138384 GCAGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTC 138443
||||||||||| |||||||| || ||||| | | | |||||||| ||||||||||| ||
Sbjct 469 GCAGCCGCCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATC 410
Query 138444 GCTCATAGTAC-GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCG 138502
| | || | || | ||||| || || || |||| | || |||||||| || || |
Sbjct 409 GGAAAGCGTCCTGCCA-TCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAG 351
Query 138503 GAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGAC 138561
|||| ||||| || || || ||| | || | || | | || | || || | | |
Sbjct 350 GAGGAATACCCTCCTTATC-CTGAATCTTCGCCTTCACATTCTCGATAGTATCTGATGGC 292
Query 138562 TCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615
|| || || | || | || || ||||||||||| || || || |||||||||
Sbjct 291 TCAACATCCAAAGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCATG 238
>seq3187
Length=81671
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483
||||| ||||| ||||||||| | ||| | ||| || || || || || | ||
Sbjct 67563 TCCTTCTGAATATTGTAGTCGGAGAGAGTTCTGCCGTCATCAAGCTGCTTTCCAGCGAAG 67504
Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TG 138542
|| || ||||| ||||| ||||| ||||| |||||||| ||| | || | || | |
Sbjct 67503 ATAAGGCGCTGCTGGTCTGGAGGAATACCCTCTTTGTCC-TGAATCTTCGCCTTCACATT 67445
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
||| | ||||||| | |||||| || | || | || || || ||||| || || ||
Sbjct 67444 TTCGATAGTGTCGGAAGGCTCCACATCAAGGGTAATAGTCTTCCCCGTCAGCGTCTTCAC 67385
Query 138603 AAAAATCTGCAT 138614
||||||||||||
Sbjct 67384 AAAAATCTGCAT 67373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496240291510080
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |