Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq270 86.0 7e-12 >seq270 Length=46145 Score = 86.0 bits (94), Expect = 7e-12 Identities = 105/141 (74%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 36827 TTAAAAATCTTCATCTA-ACGTAAATTTTATTT--CCTTATTACTATTCATAACTCCCAT 36883 ||| || ||| |||||| || || ||| || | |||||| || ||||||||| Sbjct 45864 TTAGAAGTCTGCATCTAGACAGAATGTTTGTTCTGCTTTATTAATAACCATAACTCCTGC 45923 Query 36884 TTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATT 36943 ||||| || || ||||||| ||| || || |||||||| ||||||| || || || | Sbjct 45924 CTTTTGGTAATCCCCAACTCTTCTCTCAAAGAAATTTGTTTTTCCTTGTAAAGAAATCAT 45983 Query 36944 TTCCATAAAATCAAATGGATT 36964 |||||||||||||| ||||| Sbjct 45984 ATCCATAAAATCAAAAGGATT 46004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592290412286560