Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06]
3,564 sequences; 45,975,062 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq2330 127 2e-24
>seq2330
Length=2393
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| ||||| | || |||||||||||||| || || || || ||||||||||
Sbjct 237 CCACCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAA 178
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || ||| |||| |||| ||||| || || || || | |||||| ||||| || |||
Sbjct 177 AGCGTCCTGCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGGAGGA 118
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || ||||| ||||| || || ||| | || | || || || | ||| ||
Sbjct 117 ATACCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATCGTATCTGATGGTTCGACA 58
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| | ||||| || || || || | ||| || || || |||||||||
Sbjct 57 TCCAAAGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCATG 10
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| ||||| | || |||||||||||||| || || || || ||||||||||
Sbjct 465 CCGCCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAA 406
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || ||| |||| |||| ||||| || || || || | |||||| ||||| || |||
Sbjct 405 AGCGTCCTGCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGGAGGA 346
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| || || ||||| ||||| || || ||| | || | ||| || || | || ||
Sbjct 345 ATACCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATAGTATCTGATGGCTCAACA 286
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
|| | ||||| || || || || | ||| || || || |||||||||
Sbjct 285 TCCAAAGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCATG 238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396261187152348
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |