Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1946 170 1e-37 >seq1946 Length=2437 Score = 170 bits (188), Expect = 1e-37 Identities = 148/184 (80%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 25914 CATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTC 25973 |||||| | ||| | | |||||||| ||| || ||||| | ||| ||||| ||||| Sbjct 1447 CATTTTCATATACTCTTTGCATAAATAGATCAGGTATCCATAGAGCAGGAAATAGATCTC 1506 Query 25974 TCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTG 26033 | || ||||| |||||||| || ||||| ||| ||| ||||||||| ||||| ||||||| Sbjct 1507 TTGCCCTCATCTCTTCTTTGCCATGATTTTTTCTTATATCTAAGAATTCAAATATATCTG 1566 Query 26034 AGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTA 26093 ||||||||||||| ||| | ||||| ||| ||||||||||| ||||| |||||||||| Sbjct 1567 CATGCCATGGTTCTAGATATACAGCAAGACTTCCTTTTCTTTTCCCTCCTCCTTGATCTA 1626 Query 26094 CGTA 26097 | || Sbjct 1627 CATA 1630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253029008891300