Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq270 98.7 1e-15 >seq270 Length=46145 Score = 98.7 bits (108), Expect = 1e-15 Identities = 126/170 (74%), Gaps = 3/170 (2%) Strand=Plus/Plus Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920 || |||| ||| || || ||| || |||| ||||||||||| ||||||| || || || Sbjct 45922 GCCTTTTGGTAATCCCCAACTCTTCTCTCAAAGAAATTTGTTTTTCCTTGTAAAGAAATC 45981 Query 17921 AAATTCATAAAATCAAATGGATTAGTGGTTTTATAATAT-TTTTCTTGTATTAATTCGTA 17979 | || |||||||||||| ||||| | ||| ||||| |||||| | ||| Sbjct 45982 ATATCCATAAAATCAAAAGGATTTCTTACATTA-AATATCTTTTCTCCTCCTAAACAAAC 46040 Query 17980 TAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATC-GCAA 18028 |||||| | ||| || |||||||| | |||||| ||||| ||||| |||| Sbjct 46041 TAATAAACGATCAGCAACAAATTCTATATATTGAGACATTAAATCTGCAA 46090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731839395102400