Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq270 109 1e-18 >seq270 Length=46145 Score = 109 bits (120), Expect = 1e-18 Identities = 125/163 (77%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 |||||||| || |||| || | || || || ||||||||||||| ||| || || | | Sbjct 45925 TTTTGGTAATCCCCAACTCTTCTCTCAAAGAAATTTGTTTTTCCTTGTAAAGAAATCATA 45984 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATAT-TTTTCTCCTATCAATACATA-TA 38949 | |||||||||||| |||||| | |||| ||||| ||||||||| | | ||| | || Sbjct 45985 TCCATAAAATCAAAAGGATTTCTTACATTA-AATATCTTTTCTCCT-CCTAAACAAACTA 46042 Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTC 38992 |||| | ||| || |||||||| | |||||| ||||||| || Sbjct 46043 ATAAACGATCAGCAACAAATTCTATATATTGAGACATTAAATC 46085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905095676191200