Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2330 107 1e-18 >seq2330 Length=2393 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||||||||| | ||||||||| || || ||| || || |||||||||||||| Sbjct 237 CCACCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAA 178 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || |||| || || ||||| ||||| | |||||||||||| | || Sbjct 177 AGCGTCCTGCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGGAGGA 118 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || || || ||| ||| ||| |||| || | || || || ||| || Sbjct 117 ATACCCTCCTTATCCTGAATCTTCGCCTTC-ACATTCTCGATCGTATCTGATGGTTCGAC 59 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || || ||||||||||| Sbjct 58 ATCCAAAGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 11 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||||||| | ||||||||| || || ||| || || |||||||||||||| Sbjct 465 CCGCCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAA 406 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || |||| || || ||||| ||||| | |||||||||||| | || Sbjct 405 AGCGTCCTGCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGGAGGA 346 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || || || ||| ||| ||| |||| || | || || || || || Sbjct 345 ATACCCTCCTTATCCTGAATCTTCGCCTTC-ACATTCTCGATAGTATCTGATGGCTCAAC 287 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || || ||||||||||| Sbjct 286 ATCCAAAGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328689722330880