Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2330 100 7e-16 seq3187 87.8 4e-12 >seq2330 Length=2393 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || ||||||||||| || ||| || || || |||| Sbjct 26 AAGACTCTGACTGGAAAGACCATCACTTTGGATGTCGAACCATCAGATACGATCGAGAAT 85 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || || ||| || || || | || || ||| Sbjct 86 GTGAAGGCGAAGATTCAGGATAAGGAGGGTATTCCTCCTGATCAGCAGCGTCTCATTTTC 145 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| |||| ||||| ||||| | ||||||||||| | ||||| |||||| Sbjct 146 GCCGGCAAGCAGCTGGAGGATGGCAGGACGCTTTCCGATTACAACATTCAGAAGGAGTCT 205 Query 206365 ACTCTTCA 206372 || ||||| Sbjct 206 ACCCTTCA 213 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || ||||| || ||||||||||| || || || || || |||| Sbjct 254 AAGACTCTGACTGGAAAGACCATCACTTTGGATGTTGAGCCATCAGATACTATCGAGAAT 313 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| |||||||| || || || || ||| || || || | || || ||| Sbjct 314 GTGAAGGCGAAGATTCAGGATAAGGAGGGTATTCCTCCTGATCAGCAGCGTCTCATTTTC 373 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| |||| ||||| ||||| | ||||||||||| | ||||| |||||| Sbjct 374 GCCGGCAAGCAGCTGGAGGATGGCAGGACGCTTTCCGATTACAACATTCAGAAGGAGTCT 433 Query 206365 ACTCTTCA 206372 || ||||| Sbjct 434 ACCCTTCA 441 >seq3187 Length=81671 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || ||||| || || || || || || | || ||||| ||| ||| Sbjct 67376 CAGATTTTTGTGAAGACGCTGACGGGGAAGACTATTACCCTTGATGTGGAGCCTTCCGAC 67435 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| |||||||| || ||||| || ||| || ||| || Sbjct 67436 ACTATCGAAAATGTGAAGGCGAAGATTCAGGACAAAGAGGGTATTCCTCCAGACCAGCAG 67495 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| ||||||||| | || || || || ||| | |||| ||||| | Sbjct 67496 CGCCTTATCTTCGCTGGAAAGCAGCTTGATGACGGCAGAACTCTCTCCGACTACAATATT 67555 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| || ||||||||| Sbjct 67556 CAGAAGGAAAGCACTCTTCAC 67576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181766833630444