Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06]
3,564 sequences; 45,975,062 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq2330 100 3e-16
>seq2330
Length=2393
Score = 100 bits (110), Expect = 3e-16
Identities = 154/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| |||| |||||||| | | | ||||| || ||||||||||| ||| | || |
Sbjct 457 CAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAAAGCGTCCT 398
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
||| || ||||| || |||| | || |||||||| ||||| ||||| || || ||
Sbjct 397 GCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGGAGGAATACCCTC 338
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||||| ||| || |||| | || | |||||| | ||||| || || | ||
Sbjct 337 CTTATCCTGAATCTTCGCCTTCACATTCTCGATAGTATCTGATGGCTCAACATCCAAAGT 278
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
| || || ||||||||||| || | ||| |||||||||
Sbjct 277 GATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCATG 238
Score = 91.5 bits (100), Expect = 1e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 131905 CAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACG 131964
||| |||| |||||||| | | | ||||| || ||||||||||| ||| | || |
Sbjct 229 CAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAAAGCGTCCT 170
Query 131965 CGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTC 132024
||| || ||||| || |||| | || |||||||| ||||| ||||| || || ||
Sbjct 169 GCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGGAGGAATACCCTC 110
Query 132025 TTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGT 132084
||||| ||| || |||| | || | ||||| | || || || || | ||
Sbjct 109 CTTATCCTGAATCTTCGCCTTCACATTCTCGATCGTATCTGATGGTTCGACATCCAAAGT 50
Query 132085 CAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATG 132124
| || || ||||||||||| || | ||| |||||||||
Sbjct 49 GATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCATG 10
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476589966971040
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |