Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1684 87.8 3e-11 >seq1684 Length=4104 Score = 87.8 bits (96), Expect = 3e-11 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 1601360 TGCTTGCCCATGGCCGTCTGGTAGATGTTGCGCGGCGCCTGGTTGTGGTTGGAAAACGGG 1601419 ||||| ||||| || ||||||| | ||| ||||||| ||||||||||| | |||||| Sbjct 1902 TGCTTCCCCATAGCGCTCTGGTAAACGTTACGCGGCGACTGGTTGTGGTCAGGAAACGGA 1843 Query 1601420 ATGATGGACGCGCAGGCGCCCAGCATGAGCAGCGGGTGGACCTCGACGTGCGT 1601472 |||||||||||||| |||||| || | ||| || | |||| |||||| Sbjct 1842 ATGATGGACGCGCAAACGCCCAAAATCAAGGACGGATGAATCTCGCAGTGCGT 1790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177467445649368