Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq648 464 2e-125 seq655 196 1e-44 seq2330 156 1e-32 seq3187 143 8e-29 seq270 122 3e-22 seq1850 113 1e-19 seq1143 113 1e-19 seq3112 109 2e-18 seq1946 91.5 4e-13 seq3251 89.7 2e-12 seq3119 84.2 7e-11 seq33 84.2 7e-11 >seq648 Length=64315 Score = 464 bits (514), Expect = 2e-125 Identities = 1032/1529 (67%), Gaps = 27/1529 (2%) Strand=Plus/Minus Query 349203 TAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAG 349262 |||| || ||||| ||||| || ||||| ||||| | ||| ||| | |||||| |||||| Sbjct 2086 TAGGTATAGATTTGGGTACAACATATTCATGTGTAGGTGTATGGAAGAATGATGGTGTAG 2027 Query 349263 AAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAA 349322 | ||||| ||||||||||||||||| | ||||| || || || || |||||||| || | Sbjct 2026 AGATAATAGCAAATGATCAAGGTAATCGTACAACCCCTTCTTATGTAGCATTTACGGATA 1967 Query 349323 CTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGG 349382 | ||| | | | || ||| | ||||| ||||| | || |||||| | ||||| | Sbjct 1966 CAGAGAGATTAGTAGGGGATGCAGCAAAGAATCAGGTAGCAAGGAATCCAGAGAATACAG 1907 Query 349383 TTTTTGATGCTAAGCGACTTATTGGTAG-AAGTTTTTCTGACAAATCTACACAATCTGAT 349441 | |||||||| || | | || ||||| |||| | | || | || ||| | || Sbjct 1906 TATTTGATGCAAAAAGGTTGATAGGTAGGAAGTATGAC-GATCCAGCTGTACAGGCAGAC 1848 Query 349442 CTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTT 349501 | || |||| || |||| |||| | | || | ||||||| | || || || Sbjct 1847 ATGAAGCATTGGCCATTTATTGTTAAGGGAGGACCAGGAGGTAAACCATTAATAGAAGTA 1788 Query 349502 GAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTT 349561 | || |||| | | ||| |||| || || || || | ||||| ||| | Sbjct 1787 AATTACCAAGGAATAAAGAAAACATTTCATCCTGAGGAGATAAGTGCCATGGTATTAATG 1728 Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621 || |||||||| ||||||||| || | ||||| || | ||| || || || || || Sbjct 1727 AAGATGAAGGAGATTGCTGAACAATTTATAGGTAAAGAAATAAAAGAAGCAGTAATAACA 1668 Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681 ||||| || || ||||||||| | ||| | |||||||||||||| || | || || Sbjct 1667 GTACCTGCATACTTTAATGATTCACAGAGACAGGCAACAAAAGATGCAGGTACTATAGCA 1608 Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741 || |||||||| || | || || ||||| || || || |||||||| || |||||| | Sbjct 1607 GGATTAAATGTATTACGTATAATAAATGAGCCAACAGCAGCAGCAATAGCCTATGGGTTG 1548 Query 349742 GATAAAATGAGTGACCAAGaaaaa--aaTATTCTTATTTTTGATTTAGGTGGTGGTACTT 349799 ||||| | || ||| | || | | ||| ||||||| |||||| | || || || || | Sbjct 1547 GATAAGA--AGGGACAAGGAGAGATGAATGTTCTTATCTTTGATATGGGGGGAGGGACCT 1490 Query 349800 TTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859 ||||||| || | || || | || || || || ||||| || || || || || || | Sbjct 1489 TTGATGTCTCCTTGCTTACTATAGAGGATGGCATCTTTGAGGTCAAGGCTACAGCAGGAG 1430 Query 349860 ATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGT-TA-AAGA 349917 |||||||||| || |||||||| ||||||||| | | || | |||||| || |||| Sbjct 1429 ATACACATCTAGGGGGAGAAGACTTTGATAATAGATTAGTA--GATTTTTGTATACAAGA 1372 Query 349918 ATTTAAGCGTCAAGCTAAA---ATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCT 349974 |||||| | | || | | ||| | ||||| ||| ||| | | | || Sbjct 1371 TTTTAAGAGAAAGAATAGATCCAAGGATCCAAGTAATAATAGTAGGGCATTAAGGAGACT 1312 Query 349975 AAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGA 350034 | | || ||| || | || ||| | | || || ||| ||| | |||| || Sbjct 1311 ACGTACACAGTGCGAGAGAGCAAAGAGGACACTAAGTAGTAGTACACAAGCTACTATAGA 1252 Query 350035 AATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGA 350094 |||||| | | ||| || | |||| || | || | | | ||| | || || Sbjct 1251 GATTGATAGTTTATATGAGGGTATTGATTACTCTGTCTCCTTATCTAGGGCTAGATTCGA 1192 Query 350095 AGAATTATGTATGGATCTTTTTAGAGCAACAATGG-AT-CCTGTGGAAAAAGTATTAAAA 350152 ||||||||||||||| ||| | ||| | || || || ||||||||| ||||| Sbjct 1191 GGAATTATGTATGGATTATTTCCGT--AACTCTCTTATACCCGTAGAAAAAGTACTAAAA 1134 Query 350153 GATGCAAAAATGTCCAAAA-ATCAGATTG-ATGAAGTAGTTTTAGTTGGTGGTTCTACAC 350210 ||| | ||| | | || | || | |||| ||||| | || || || ||| Sbjct 1133 GAT--AGTAATATAGATAAGAGGAGTGTACATGAGGTAGTACTGGTAGGAGGGAGCACAA 1076 Query 350211 GTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGAT 350270 | || || || | ||||| | || || || |||||||| || ||||| | ||||| Sbjct 1075 GAATACCCAAGATACAACAACTTATACAAGAATTCTTTAATGGTAAGGAACCATGTAGAT 1016 Query 350271 CAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTG 350330 | |||||||| ||||| |||||||| |||||||| ||||| |||||| |||| || | Sbjct 1015 CTATTAATCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTACAGGCAGCTATACTAAAAG 956 Query 350331 GAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTG 350390 || || ||| | || | | ||| ||||| || ||||||| |||| | || | | Sbjct 955 GAGTAAATAGTACACAAGTACAAGATTTATTATTATTAGATGTTGCTCCTTTATCATTAG 896 Query 350391 GATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTA 350450 || |||| || | || | ||||||||| | || || |||| || |||| | Sbjct 895 GACTAGAGACAGCAGGAGGAGTAATGACAAAATTAATAGAGAGGAATACAACAATACCAA 836 Query 350451 CAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAG 350510 ||||||| || |||| || | |||| ||||||||||||||||| ||| ||||| | Sbjct 835 CAAAAAAATCGCAAATATTCACAACATATGCAGATAATCAGCCAGGTGTACTTATTCAGG 776 Query 350511 TATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAA 350570 | | ||| || || | || ||||| ||||||||| ||| ||| | || ||| Sbjct 775 TGTATGAGGGGGAGAGGGCAATGACTAAGGATAATAATTTACTAGGAAAGTTCCATCTAG 716 Query 350571 GTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATT 350630 || || || || ||||||||||| || || || || || | || ||||| ||| Sbjct 715 ATGGTATACCTCCTGCACCTAGAGGAGTACCACAAATAGAGGTTACCTTTGATATAGATG 656 Query 350631 CAAATGGTATTTTAAATGTTACCGC---AGTTGAAAAATCAAGTGGTAAAAGTAGTAAGG 350687 | ||||||||| | |||||||| || || ||||||| || | ||||||| | Sbjct 655 CCAATGGTATTATGAATGTTACTGCTACAGA-GAAAAATACAG--GAAAAAGTAACCAAA 599 Query 350688 TAGAAATTACTAATGATAAATCTAGACTT 350716 || |||||||||||||| ||||||| Sbjct 598 TAACTATTACTAATGATAAGGGTAGACTT 570 Score = 352 bits (390), Expect = 9e-92 Identities = 749/1106 (68%), Gaps = 13/1106 (1%) Strand=Plus/Plus Query 182693 ACTAATTAAATCTTTAGTTTTTTCATCATTTATTATACTTTGCATTTGAAAACAATATCC 182752 ||||||| ||| ||| ||||| |||| | | |||| ||| | ||||||| Sbjct 411 ACTAATTTTATCCTTAACCTTTTCCTCATCAAGTGTACTCCTCATACTATAACAATAATT 470 Query 182753 TTCAAGATTATTTTTAGCCTCAATACTTCCTTTAAATTCCTCATCTTCTTTAGCATACTT 182812 || ||||||||||| ||||| || ||| |||| ||||||| ||| |||||| Sbjct 471 CTCTAGATTATTTTTTGCCTCTATCCTTTGTTTATTAGCCTCATCCTCTGCCTTATACTT 530 Query 182813 TTCAGCATCCATTGTCATTCTTTCTATTTCATCTTTAGAAAGATGACCTGCATCATTTGT 182872 ||| || || |||||| |||||||| | | | ||| ||| |||||| || Sbjct 531 TTCTGCCTCAGCAACCATTCTATCTATTTCCCCCTGACTAAGTCTACCCTTATCATTAGT 590 Query 182873 AATTACTACATTACTAGTTACTCCAGTTGATTTTTCAA-GT-GCGCTAACATTTAAAATA 182930 ||| || | || || ||| || ||||||| || || ||||||| | |||| Sbjct 591 AATAGTTATTTGGTTACTTTTTCCTGT--ATTTTTCTCTGTAGCAGTAACATTCATAATA 648 Query 182931 CCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGTGGCATTGGTGGA 182990 ||||| | || | |||||| | || || || ||||| || |||| || || || Sbjct 649 CCATTGGCATCTATATCAAAGGTAACCTCTATTTGTGGTACTCCTCTAGGTGCAGGAGGT 708 Query 182991 ATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTTGCTCTCTCGCCT 183050 || ||| || | || | |||| | ||||||||| ||||| |||| ||||| || Sbjct 709 ATACCATCTAGATGGAACTTTCCTAGTAAATTATTATCCTTAGTCATTGCCCTCTCCCCC 768 Query 183051 TCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAAAAAACTTGCTTT 183110 ||||| || |||||| || ||||||||||||| ||| || | || | |||| | Sbjct 769 TCATACACCTGAATAAGTACACCTGGCTGATTATCTGCATATGTTGTGAATATTTGCGAT 828 Query 183111 TTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTACTTCTCTGGCAGTT 183170 || || | || || |||| ||| | | | | | ||||||||| ||| || || Sbjct 829 TTTTTTGTTGGTATTGTTGTATTCCTCTCTATTAATTTTGTCATTACTCCTCCTGCTGTC 888 Query 183171 TCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCTGATGTTT-TATCTGA 183229 |||| |||||||||||| || || ||||||| ||||||||||||| | || | | | Sbjct 889 TCTAGTCCTAATGATAAAGGAGCAACATCTAATAATAATAAATCTTGTACTTGTGTACTA 948 Query 183230 TTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGG 183289 |||| | | ||| || || || || |||||||||||||| |||||||| ||||| || Sbjct 949 TTTACTC-CTTTTAGTATAGCTGCCTGTACAGCTGCACCATAAGCAACAGCCTCATCAGG 1007 Query 183290 GTTAATTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTT 183349 ||||| || | | || ||| || |||||||| |||||| | | |||||| || || Sbjct 1008 ATTAATAGATCTACATGGTTCCTTACCATTAAAGAATTCTTGTATAAGTTGTTGTATCTT 1067 Query 183350 TGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATATTACTTTTA-CTA-ATT 183407 || ||||| || || || || | |||||| |||| | | | || ||| ||| ||| Sbjct 1068 GGGTATTCTTGTGCTCCCTCCTACCAGTACTACCTCATGTACACTCCTCTTATCTATATT 1127 Query 183408 TGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAAATAAATCTATACAT 183467 | |||||||| |||||||| || || | || || | || |||| |||||| Sbjct 1128 ACT--ATCTTTTAGTACTTTTTCTACGGGTATAAGAGAGTTACGGAAATAATCCATACAT 1185 Query 183468 AACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATACCATTATATAAGGAA 183527 || || || ||||| || |||| ||| || | | | |||||||| | |||||| | Sbjct 1186 AATTCCTCGAATCTAGCCCTAGATAAGGAGACAGAGTAATCAATACCCTCATATAAACTA 1245 Query 183528 TCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTAGCTCGTTCACATGCT 183587 ||||| || || | | ||||||| || ||| || || |||| || || | Sbjct 1246 TCAATCTCTATAGTAGCTTGTGTACTACTACTTAGTGTCCTCTTTGCTCTCTCGCACTGT 1305 Query 183588 GTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATAT-CTTG--TTTATGTTTTCTT 183644 || | ||||| | ||||| || ||||| | || |||| | ||| ||||| Sbjct 1306 GTACGTAGTCTCCTTAATGCCCTACTATTATTACTTGGATCCTTGGATCTATTCTTTCTC 1365 Query 183645 TTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCACCACCTAAATGT 183704 ||||| || ||| || | | |||||| ||||||| ||||| || |||| |||| Sbjct 1366 TTAAAATCTTGTATACAAAAATCTACTAATCTATTATCAAAGTCTTCTCCCCCTAGATGT 1425 Query 183705 GTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTTAAAATTGATACA 183764 ||||| || || ||||| || || ||||| || || || || ||| | | | || ||| Sbjct 1426 GTATCTCCTGCTGTAGCCTTGACCTCAAAGATGCCATCCTCTATAGTAAGCAAGGAGACA 1485 Query 183765 TCAAATGTACCACCACCCAAATCAAA 183790 ||||| || || || |||| |||||| Sbjct 1486 TCAAAGGTCCCTCCCCCCATATCAAA 1511 >seq655 Length=63591 Score = 196 bits (216), Expect = 1e-44 Identities = 413/612 (67%), Gaps = 17/612 (3%) Strand=Plus/Plus Query 349202 ATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTA 349261 || || || ||||| ||||| || || || || |||| || | | | | |||||| Sbjct 60744 ATTGGTATTGATTTGGGTACGACATACTCGTGCGTTGGGGTGTATAGACAGGGACGTGTA 60803 Query 349262 GAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAA 349321 || ||||| | ||||||||||| || | | || || || || | ||| | || Sbjct 60804 GATATAATACCTAATGATCAAGGAAATCGTATTACTCCTAGTTATGTATCTTTTGCTGAT 60863 Query 349322 ACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACG 349381 |||| | || || || | ||||| || | || || ||| |||| |||||| Sbjct 60864 GATGAGAGACGTATAGGAGAAGCAGCAAAGAACGAGGCAGCAAATAACCCAACAAATACA 60923 Query 349382 GTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGAT 349441 | ||||||| || || || || || ||||| ||| ||| ||| |||| ||| Sbjct 60924 ATATTTGATGTAAAACGTCTAATAGGGAGAAGATTTAATGAGAAAGAAGTACAAAGAGAT 60983 Query 349442 CTAAAACATT--TTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGG 349499 ||| ||| |||||| || | || || ||||| ||| ||||| |||| | | Sbjct 60984 --AAAGAATTACTTCCTTATAATATTATTAATAAAGATGGT---AAACC--TTATATACG 61036 Query 349500 TTGAATA--TAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTT 349557 | || ||| || ||| ||| |||| ||| || ||| | || | ||||| || Sbjct 61037 TGTTATGGTTAAGGGACAACCTAAAGAATTAGCACCTGAGGAAGTATCTGCTATGGTCTT 61096 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 || ||||||||||||| |||| || ||| | ||| || ||| | |||||||| | Sbjct 61097 AGGTAAAATGAAGGAAGTTGCAGAGAATTATCTTGGTAAAGAAGTTAAGAATGCTGTTGT 61156 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 |||||| || || || ||||||||||| || | ||||||||||| || || || Sbjct 61157 TACTGTTCCTGCATACTTTAATGATGCACAAAGACAAGCAACAAAAGACGCAGGTGCTAT 61216 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||| || | |||||| | | || ||||||||||| |||||||| || ||||| || || Sbjct 61217 TGCAGGTCTTAATGTTATTCGTATTATTAATGAACCTACTGCTGCTGCTATTGCTTACGG 61276 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 |||||||||| | | ||||| | ||| ||| | | ||| | ||||||||||| Sbjct 61277 TCTTGATAAAA------AAGACGAAAAGACTATCCTTGTCTACGATCTTGGTGGTGGTAC 61330 Query 349798 TTTTGATGTATC 349809 ||||||||||| Sbjct 61331 CTTTGATGTATC 61342 Score = 129 bits (142), Expect = 2e-24 Identities = 297/440 (68%), Gaps = 17/440 (4%) Strand=Plus/Plus Query 350078 ACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTTAGAGCA-ACAATGGATCCT 350134 || ||||| |||||| ||||| | ||| ||| || || || | ||| || | ||| Sbjct 61947 ACTCGTGCAAAGTTTGAGGAATT--GAATGCCGAT-TTATTCCAGAAGACATTGAAACCT 62003 Query 350135 GTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTA 350194 || || |||| | |||||||| | | ||| ||||| || ||| | ||| | Sbjct 62004 GTTAAACAAGTTCTTGAAGATGCAGACTTAAAGAAATCACAGATAGACGAAATTGTTCTT 62063 Query 350195 GTTGGTGGTTCTACACGTATTCCAAAAGTTCAAC-AGTTACTATCTGAGTTTTTTAATGG 350253 ||||||||||| ||||||||||| || | |||| | ||| || || || ||||| || Sbjct 62064 GTTGGTGGTTCAACACGTATTCCTAAGATCCAACAACTTATTA-AGGAATTCTTTAACGG 62122 Query 350254 CAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCA 350313 ||||| ||| ||| ||||||||| |||||||| ||||| |||||||| ||||| || Sbjct 62123 TAAAGAGCCTAACAGAGGAATTAATCCTGATGAAGCCGTTGCTTATGGTGCAGCTGTACA 62182 Query 350314 GGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGT 350373 ||| ||| ||||| ||| | || | | || ||| ||| |||| ||||| Sbjct 62183 AGCAGGTATCTTATCAGGAGA----AGGTACACAAGATATGGTCT-----TACTTGATGT 62233 Query 350374 AACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAG 350433 ||||| ||| | ||||| | || || |||| | || ||| || ||||| | Sbjct 62234 TACTCCTCTTACTCTTGGTATTGAGACAGCTGGAGGTGTCATGGCTAAAGTTATTAACAA 62293 Query 350434 AAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCC 350493 |||| | | || || || ||| | |||||||| ||||| | | || || ||| | Sbjct 62294 GAATACCGTTATTCCCACCAAGAAGACACAAACTTTCTCTACTTACTCTGACAACCAGTC 62353 Query 350494 AGCGGTAACAATTCAAGTAT 350513 || || ||||| |||| Sbjct 62354 CGCTGTCCTCATTCAGGTAT 62373 Score = 87.8 bits (96), Expect = 5e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 183252 GCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATA-ATTC 183310 ||||| |||||||||||||| ||||| |||||||| || |||||| | | || || Sbjct 62185 GCTTGTACAGCTGCACCATAAGCAACGGCTTCATCAGGATTAATTCCTC-TGTTAGGCTC 62127 Query 183311 TTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACC 183370 ||| || ||||| ||||| || | |||||| || || ||||| | ||||||||||| Sbjct 62126 TTTACCGTTAAAGAATTCCTTAATAAGTTGTTGGATCTTAGGAATACGTGTTGAACCACC 62067 Query 183371 GACTAATACTACTTCATCGATATTACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTC 183430 || | || | ||| || || | ||| | | | || ||||| | ||||| || Sbjct 62066 AACAAGAACAATTTCGTCTATCTGTGATTTCTTTAAGTCTGCATCTTCAAGAACTTGTTT 62007 Query 183431 AACAGGGTCCATAGTTTTTCTAAATAAATC 183460 |||||| | || || || |||||||| Sbjct 62006 AACAGGTTTCAATGTCTTCTGGAATAAATC 61977 >seq2330 Length=2393 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| | || | || || | |||||| |||||||| || ||||| || ||||| Sbjct 241 CATGCCACCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATC 182 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || | ||||| || || || || || || || || ||||| ||||||||||| Sbjct 181 GGAAAGCGTCCTGCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGG 122 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || ||||||||||| || || || ||||| || |||| ||| |||||||| Sbjct 121 AGGAATACCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATCGTATCTGATGGTTC 62 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | || | |||||||| || || || || || || |||||||| Sbjct 61 GACATCCAAAGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 11 Score = 149 bits (164), Expect = 2e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || | |||||| |||||||| || ||||| || ||||| || | || | ||||| Sbjct 450 AGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAAAGCGTCCTGCCATCC 391 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || || || || || ||||| ||||||||||||||||| || || |||||| Sbjct 390 TCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGGAGGAATACCCTCCTTATCC 331 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 ||||| || || || ||||| || || | ||| ||||| ||||| || | || | ||| Sbjct 330 TGAATCTTCGCCTTCACATTCTCGATAGTATCTGATGGCTCAACATCCAAAGTGATGGTC 271 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || || || || || |||||||| Sbjct 270 TTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 239 >seq3187 Length=81671 Score = 143 bits (158), Expect = 8e-29 Identities = 165/220 (75%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 140518 GTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTC 140577 |||| |||| |||| |||||||| || || |||||||| || || || | |||| Sbjct 67589 GTAAGCTTAC--CAAG-TGAAGAGTGCTTTCCTTCTGAATATTGTAGTCGGAGAGAGTTC 67533 Query 140578 GCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTT 140637 || || ||||| || |||||||| ||||| || || ||||| || |||||||| || | Sbjct 67532 TGCCGTCATCAAGCTGCTTTCCAGCGAAGATAAGGCGCTGCTGGTCTGGAGGAATACCCT 67473 Query 140638 CTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTG 140697 |||| |||||||| || || || ||||| || || | || || || || || ||||| | Sbjct 67472 CTTTGTCCTGAATCTTCGCCTTCACATTTTCGATAGTGTCGGAAGGCTCCACATCAAGGG 67413 Query 140698 TAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| ||||| || || || || || |||||||||||||| Sbjct 67412 TAATAGTCTTCCCCGTCAGCGTCTTCACAAAAATCTGCAT 67373 >seq270 Length=46145 Score = 122 bits (134), Expect = 3e-22 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 223415 TACTCACCTACTCTTCTTTCaaaaaaaTTTGTTTTTCCTTCTATACTTATCATTTCCATA 223474 || || || |||||||| ||||| |||||||||||||||| || | ||||| |||||| Sbjct 45931 TAATCCCCAACTCTTCTCTCAAAGAAATTTGTTTTTCCTTGTAAAGAAATCATATCCATA 45990 Query 223475 AAATCAAACGGATTACTAGAATTATAAATTTTATTATTTCCTAATTGAACTGCTAATCTA 223534 |||||||| ||||| || |||| | || || | |||||| |||| ||| | | Sbjct 45991 AAATCAAAAGGATTTCTTACATTAAATATCTTTTCTCCTCCTAAACAAACTAATAAACGA 46050 Query 223535 TCTGCTACAAATTCTATATATTGTGACATTAA 223566 || || ||||||||||||||||| |||||||| Sbjct 46051 TCAGCAACAAATTCTATATATTGAGACATTAA 46082 >seq1850 Length=3576 Score = 113 bits (124), Expect = 1e-19 Identities = 211/302 (70%), Gaps = 10/302 (3%) Strand=Plus/Minus Query 312634 TTCTAAATTAACATAGTATTGTTTTATTCCCTCTAATGTTAACCGTTCGGCTTTAACAA- 312692 || || || || ||| |||||| ||| ||||||||||| | |||| |||| | Sbjct 2840 TTGTACATCAATATAATATTGTGCTATACCCTCTAATGTAA---GTTCATCTTTTTTTAC 2784 Query 312693 TAATTTTAATT--GGATTTCTCATAAATTTTTCTGTTAAATAATGCAGAGATGATGGCAT 312750 |||| || || || |||||||| |||| | ||||| | | | | | || ||||| Sbjct 2783 TAATATTCTTTTAGGTTTTCTCATGAATTGTGTAGTTAATTCAAGTATATCTGCAGGCAT 2724 Query 312751 AGTAGCACTAAATAAAGCTATTTGAATATTATTTGATAAGTATTGAAAAACACTATA-TA 312809 ||| ||||||||||| || | ||| | || | | ||| | ||||| ||| ||| || Sbjct 2723 AGTTGCACTAAATAATGCAACTTGTACATCTTGAGGTAAATGCTGAAATACAG-ATAGTA 2665 Query 312810 TCTGTTCTTTAAATCCAGATGATAACATTTCATCTGCTTCATCTAATACCACTAGTTTTA 312869 | ||| | || ||||| ||||||||| |||||||| ||||||||||| | || | | Sbjct 2664 TTTGTGCCTTGAATCCTCTTGATAACATCTCATCTGCCTCATCTAATACAAAAAGAATCA 2605 Query 312870 TTTTATCAGTTACTATATGCTTTCTTCTC-ATCATATCATGAATTCTACCTGGGCAACCT 312928 | | |||| || ||| || ||||| |||||||||| | |||||| || |||| Sbjct 2604 TATGATCACAACGTAGATGTCTT-TTCTCCATCATATCATTTACTCTACCAGGTGTACCT 2546 Query 312929 AC 312930 || Sbjct 2545 AC 2544 Score = 105 bits (116), Expect = 2e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 312211 TATTTGTGTATTATAAAATGATTCAATATCTTTGAGATGTCTAATATCTCTTCTAGTGAC 312270 |||||||||||||||| || || || || || || || ||||| | |||| || Sbjct 3459 TATTTGTGTATTATAATGTGTCTCTATTTCCTTAAGTTGCTCCATATCATTAATAGTAAC 3400 Query 312271 AAAATTTATAGAAACACCTTTTCTTCCCCATCTGCCACTTCTTCCAATTCTATGTAGATA 312330 |||||| || | | ||||||||| || ||| ||||| | |||||||||||| | ||| Sbjct 3399 AAAATTAATTGCTATACCTTTTCTACCAAATCGTCCACTACGTCCAATTCTATGGATATA 3340 Query 312331 TGTATTAATACATTTTGGTATATCAAAATTAATAACTGTACTTACTTGTTGAATATCAAT 312390 | | ||| | ||||||||| ||||||| ||| ||||||||| | ||| || Sbjct 3339 ATTTTCTTTACTAGTAGGTATATCATAATTAATTACTAAGGATACTTGTTGTACATCTAT 3280 Query 312391 GCCTCTCGCAGTTACATTTGATGATATTAATACCCG 312426 ||||| || || || || | ||||||||| || Sbjct 3279 ACCTCTAGCTAATAAATCTGTAGTTATTAATACACG 3244 >seq1143 Length=7562 Score = 113 bits (124), Expect = 1e-19 Identities = 179/254 (70%), Gaps = 12/254 (5%) Strand=Plus/Plus Query 378250 GTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAGAATAATTCA 378309 ||||| ||||||||| || | ||| | | || ||||||||||| |||||||| || Sbjct 3020 GTTTTGCATGCAGTATCTATAATACCCTCTCTTCCTCCCATTGCATGAAAGAATAACTCC 3079 Query 378310 GTAGGAGTAAGTCCACCAATAAATGAACT---CTCAATAAATCCTCTTGCGCCTGGCGAA 378366 |||| ||| ||| | | |||| ||||| ||||||||| |||| || Sbjct 3080 TGAGGAAGAAG---ACCTGTTAGGTAACTATGCTCAACAAATCCTCTACTTTCTGGTGAG 3136 Query 378367 TCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATTCGTTTT 378426 | |||| |||| || |||||||||| | |||||| | ||| ||| | ||||| | |||| Sbjct 3137 TAATCAAATTTACTAAAATGAGGTAAAGAACGATTATTAAATCCAAAAGGAATCCTTTTT 3196 Query 378427 CCATCAACATTCTGTTGACCAAGTGCAGAAACC---ATTTGAGCAATATTTAAATCACTA 378483 || || |||||||||||||| | || || || ||||| | ||||| | ||| Sbjct 3197 CCCTCTACATTCTGTTGACC---TACACAAGCCATTATTTGTGATATATTAATGATACTT 3253 Query 378484 CCTTTAGACCCAGC 378497 ||||| || ||||| Sbjct 3254 CCTTTTGAACCAGC 3267 Score = 95.1 bits (104), Expect = 4e-14 Identities = 194/284 (68%), Gaps = 17/284 (6%) Strand=Plus/Plus Query 379160 CTTGGAAAATACCAATAATAGATTTATTATTTGCAGGACTAATAATTTGTGTAGGAA-TA 379218 |||| | |||||| || | || |||||| | |||| || ||| ||| |||| | || Sbjct 4677 CTTGTACAATACCCATGACAGGTTTATTTCCTTGAGGAGAAACAATCTGTTTAGGTACTA 4736 Query 379219 GCAGCAAGATTTAGTAACTCAATTTCAGCT------TCTTCATCTTGAGGCATATGAAGA 379272 || ||||| | | |||||| ||| || ||| ||| | | ||| ||| Sbjct 4737 ACAT-AAGATGT------TTAATTTCTGCTCTTGTTTCCTCACTTTGTGCAAGATGTAGA 4789 Query 379273 TTCATTTCATCACCATCAAAATCAGCATTATATGGCTTAGTATCTCCTACATTCATTCTA 379332 ||||| |||||||||||||| || |||||||| || |||| | || ||| | |||| Sbjct 4790 TTCATCTCATCACCATCAAAGTCTGCATTATAAGGAGAAGTAACGGATAAATTTAATCTA 4849 Query 379333 AAAGTATCACCTTGATATAAAATTTTAACAATATGACACATCATTGATAATCTATGAAGT 379392 || || | | | | ||| | | | || |||||| ||| || || | | |||| | Sbjct 4850 AATGT-TGA--GTAAGGTAATACTCTTACTCTATGACCCATTATAGACATTTTATGCAAG 4906 Query 379393 GTAGGCTGACGATTAAATAAGACACCATCCCCATCCATCATATG 379436 | ||| |||||||||||||| ||| ||| |||||| |||||| Sbjct 4907 GAAGGTTGACGATTAAATAATACATAATCACCATCCTGCATATG 4950 >seq3112 Length=30853 Score = 109 bits (120), Expect = 2e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 140580 CCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCT 140639 ||||| || || || || || || || || ||||| |||||||| |||||||| || || Sbjct 30837 CCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATACCCTCC 30778 Query 140640 TTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTA 140699 ||||||||||| || || ||||| || || || | || ||||| ||||| || | || Sbjct 30777 TTATCCTGAATCTTCGCCTTTACGTTTTCGATGGTGTCTGATGGCTCAACATCCAAAGTG 30718 Query 140700 ACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | |||||||| || || || || || || |||||||| Sbjct 30717 ATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCAT 30680 >seq1946 Length=2437 Score = 91.5 bits (100), Expect = 4e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 205167 ATGTACTCTTTCCATAAACAGATCTGAAATCCAAAGAGCATAAAAAAGGTCACGAGCGCG 205226 || |||||||| |||||| ||||| | ||||| |||||| ||| || || | || | Sbjct 1454 ATATACTCTTTGCATAAATAGATCAGGTATCCATAGAGCAGGAAATAGATCTCTTGCCCT 1513 Query 205227 AAGTTCTTCGTCTCCATGATTTTTCTTTAAATCTAAAAATTCTTCAATATCCGGATGATG 205286 | ||||| | ||||||||||| ||| |||||| ||||| ||||| | ||| Sbjct 1514 CATCTCTTCTTTGCCATGATTTTTTCTTATATCTAAGAATTCAAATATATCTGCATGCCA 1573 Query 205287 TGGTTCAATATACATAGCAAAACTTCCAGCTCTTTTTCCACCACC 205331 |||||| | ||| | ||||| |||||| |||||| || || || Sbjct 1574 TGGTTCTAGATATACAGCAAGACTTCCTTTTCTTTTCCCTCCTCC 1618 Score = 87.8 bits (96), Expect = 5e-12 Identities = 113/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 203295 ATCAGCTAATCCTTGTACTCCAATACCAATTGGTCGATGATTTAAATTACTGCGTTTAGT 203354 |||||||||||||||||| || ||||| || |||| ||| ||| |||||| || | Sbjct 1156 ATCAGCTAATCCTTGTACACCTATACCTATAGGTCTATGTTTTTTATTACTATATTCTGC 1215 Query 203355 CTTTTCTGTTGGATAAAAATTGATATCAATAATCTTATTTAAATTTTCTGTTACAATTTT 203414 || || | | |||||| |||| |||||||||| ||||| | ||| || || | ||| | Sbjct 1216 CTCTTGTATAGGATAATAATTTTTATCAATAATATTATTAAGATTATCCGTAATAATAT- 1274 Query 203415 AGTAACACT--ATGTAATTTTTCATAATCAAATT 203446 ||| | | | |||||| | ||||| ||||| Sbjct 1275 -GTACAATTTCCTTTAATTTATTATAATTAAATT 1307 >seq3251 Length=22433 Score = 89.7 bits (98), Expect = 2e-12 Identities = 73/86 (85%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 423765 AGCATGGATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAAG-CCTC 423822 |||| ||||| ||||||||||||||| | |||||| ||| |||| ||| ||| | |||| Sbjct 460 AGCACGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTGGACGATTGTCCTC 401 Query 423823 GTGGGTTCAAACCCCACTCCGTGCAT 423848 ||||||||||| |||||| ||||||| Sbjct 400 GTGGGTTCAAATCCCACTTCGTGCAT 375 Score = 86.0 bits (94), Expect = 2e-11 Identities = 72/86 (84%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 423766 GCATGGATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAAG-CCTCG 423823 ||| ||||| |||||||||| |||| | |||||| ||| |||| ||| ||| | ||||| Sbjct 190 GCACGGATGGCCGAGTGGTCGAAGGCGCCAGACTCAAGTTCTGGTGGACGATTGTCCTCG 131 Query 423824 TGGGTTCAAACCCCACTCCGTGCATT 423849 |||||||||| |||||| |||||||| Sbjct 130 TGGGTTCAAATCCCACTTCGTGCATT 105 >seq3119 Length=29783 Score = 84.2 bits (92), Expect = 7e-11 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 423766 GCATGGATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAAG-CCTCG 423823 ||| ||||| ||||||||||||||| | |||||| ||| |||| ||| || | | || || Sbjct 5500 GCACGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTGGACGGATGTCCGCG 5441 Query 423824 TGGGTTCAAACCCCACTCCGTGCAT 423848 |||||||||| |||||| ||||||| Sbjct 5440 TGGGTTCAAATCCCACTTCGTGCAT 5416 Score = 84.2 bits (92), Expect = 7e-11 Identities = 74/90 (82%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 423766 GCATGGATGCCCGAGTGGTCTAAGGGGGCAGACTTAAGATCTGCTGG-CGAAAG-CCTCG 423823 ||| ||||| ||||||||||||||| | |||||| ||| |||| ||| || | | || || Sbjct 6179 GCACGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTGGACGGACGTCCGCG 6120 Query 423824 TGGGTTCAAACCCCACTCCGTGCATTTATT 423853 |||||||||| |||||| |||||| | ||| Sbjct 6119 TGGGTTCAAATCCCACTTCGTGCAGTCATT 6090 >seq33 Length=59897 Score = 84.2 bits (92), Expect = 7e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 391023 GAAATGGCATTACCTCCGTGCCATATTTTAGCTCAATTTAATGTTGTAAAAGATGAACTT 391082 || ||||||||||| || || ||| | ||| ||||||| ||||| || | | | | Sbjct 5169 GAGATGGCATTACCACCATGTCATGTATTATGTCAATTTTATGTTAGTAATGGTAATATA 5228 Query 391083 TCTTGTTCATTATATCAGAGAAGTGGAGATGTAGGTTTAGGAGTTCCATTTAATATTGC 391141 ||||||| |||||||| | ||| | |||||||||||||| |||| |||||||| || Sbjct 5229 TCTTGTTGTTTATATCAACGTAGTTGTGATGTAGGTTTAGGTCTTCCTTTTAATATAGC 5287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515185207801892