Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20maxima_20[genbank_20GCA_5F000499605.1_202013-11-06] 3,564 sequences; 45,975,062 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2330 134 1e-26 seq3112 111 1e-19 >seq2330 Length=2393 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||||| | || ||||| ||||| || |||||| || ||||||||||| Sbjct 241 CATGCCACCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATC 182 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 || || | | || ||||||||||| ||||| || || | |||||||||||| | Sbjct 181 GGAAAGCGTCCTGCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGG 122 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 ||| | ||| ||||| ||| |||||| ||||| | | || || || | | ||| Sbjct 121 AGGAATACCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATCGTATCTGATGGTTC 62 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||| || || |||||||| || || |||||||||||||| |||||| Sbjct 61 GACATCCAAAGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCATG 10 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || ||||||| | || ||||| ||||| || |||||| || ||||||||||||| Sbjct 465 CCGCCTCTCAAACGCAGCACCAAATGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGAA 406 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || | | || ||||||||||| ||||| || || | |||||||||||| | ||| Sbjct 405 AGCGTCCTGCCATCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCAGGAGGA 346 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | ||| ||||| ||| |||||| ||||| | | || || || | | || || Sbjct 345 ATACCCTCCTTATCCTGAATCTTCGCCTTCACATTCTCGATAGTATCTGATGGCTCAACA 286 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || || |||||||| || || |||||||||||||| |||||| Sbjct 285 TCCAAAGTGATGGTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCATG 238 >seq3112 Length=30853 Score = 111 bits (122), Expect = 1e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 44183 TCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT 44242 || ||||||||||| ||||| || || | |||||||||||| | ||| | ||| ||||| Sbjct 30834 TCCTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGATCGGGAGGAATACCCTCCTTA 30775 Query 44243 TCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATC 44302 ||| |||||| ||| | || | |||||||| | | || || |||| || || Sbjct 30774 TCCTGAATCTTCGCCTTTACGTTTTCGATGGTGTCTGATGGCTCAACATCCAAAGTGATG 30715 Query 44303 GTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||| || || |||||||||||||| |||||| Sbjct 30714 GTCTTTCCAGTCAGAGTCTTCACGAAGATCTGCATG 30679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359974763366988