Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2197 102 1e-17 >seq2197 Length=12716 Score = 102 bits (112), Expect = 1e-17 Identities = 170/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 ||||||| || ||||| || || || |||||||| |||||||| || | | || |||| Sbjct 1094 GAGATAATATACAAGGTATAACAAAACCAGCTATTCGTCGTCTAGCAAGAAGAGGAGGAG 1035 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | || ||| | || || || | |||||||| || || | ||| |||||| | ||| | Sbjct 1034 TAAAACGTATTTCGGGTTTAATATATGAAGAAATACGCGGTGTATTGAAGGTATTCTTAG 975 Query 16578 AGACCGTTATCCATGATGCT-TTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | | || | ||| | || || || ||||||||||| | | | || || |||||| Sbjct 974 AAAATATAATAAAAGATTCCGTTACA-TACACCGAGCACGCAAGAAGAAAAACAGTCACC 916 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | |||||||| || || | | ||| | |||||| | | | |||||||| || || Sbjct 915 GCTATGGATATTGTTTACTCCCTAAAAAGACAAGGCAGGACTCTCTATGGTTTCGGTGGT 856 Query 16697 TAA 16699 ||| Sbjct 855 TAA 853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79065749722848