Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3225 98.7 9e-16 >seq3225 Length=28280 Score = 98.7 bits (108), Expect = 9e-16 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | || || || || | ||| | ||| || || || ||||||||||| ||| Sbjct 380 GCCACCTCTCAGGCGGAGTACCAGATGAAGGGTAGATTCTTTCTGAATGTTGTAGTCGGA 439 Query 131067 CATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 || || | || | || || ||||||||||| ||| | || | |||||||||||| |||| Sbjct 440 CAGTGTCCTGCCA-TCTTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAG 498 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCG 131184 |||| || || ||||| ||| | | ||| || | | ||| | |||||| | | ||| Sbjct 499 GGATACCCTCCTTGTC-CTGAATCTTTGCTTTCACGTTCTCTATAGTATCTGATGGCTCA 557 Query 131185 ATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | || | || | ||| || || || || || || || || |||||||| Sbjct 558 ACATCCAGAGTGATGGTCTTGCCCGTGAGCGTCTTGACAAAGATCTGCAT 607 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471951815946240