Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3225 104 2e-17 >seq3225 Length=28280 Score = 104 bits (114), Expect = 2e-17 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||||| ||| || || || || || || ||||||||||||| || || || | || Sbjct 396 AGTACCAGATGAAGGGTAGATTCTTTCTGAATGTTGTAGTCGGACAGTGTCCTGCCATCT 455 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || ||||| || |||| || ||||| ||||| ||| | ||||| ||||| Sbjct 456 TCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 515 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || |||||| ||||| | | | ||| || ||||| |||| ||||||| Sbjct 516 TGAATCTTTGCT--TTCACGTTCTCTATAGTATCTGATGGCTCAACATCCAGAGTGATGG 573 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | || || || ||||| |||||||| ||||||||| Sbjct 574 TCTTGCCCGTGAGCGTCTTGACAAAGATCTGCATT 608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405036971064640