Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq3225 143 2e-29 >seq3225 Length=28280 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| |||| || || ||||||| | || || ||| | || Sbjct 379 ATGCAAATCTTTGTGAAGACTCTGACTGGCAAGACCATCACTCTGGATGTTGAGCCATCA 320 Query 25059 GACACTATCGAGTCACTGAA-GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| |||| ||||| | ||| ||||| ||||| ||||| ||||| || Sbjct 319 GATACCATCGAAAACGTGAAAGCAAAGATTCAG-GACAAGGAAGGTATTCCTCCTGATCA 261 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | ||||| || || ||||| ||||||||| | | || || ||| ||||| Sbjct 260 GCAGCGTCTCATTTTCGCTGGAAAACAGCTAGAAGATGGTAGAACGCTGTCCGACTACAA 201 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 |||||| |||||||| || || |||||||| || | || ||||| || Sbjct 200 TATTCAGAAAGAATCTACCCTTCATTTAGTTCTTCGCCTGAGAGGTGG 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433273413671840