Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4538 82.4 8e-11 >seq4538 Length=22927 Score = 82.4 bits (90), Expect = 8e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 93506 GCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCC 93565 || ||||| ||||| || | ||| || |||||||||| || | || | || | || Sbjct 10584 GCAGCAAAGAAAGCTAAAACATGTTTAATAAAATGTTGTTCTTTTTCATCGAGACGAGCC 10643 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || || | || ||| | ||| | |||||| |||||||||| || ||||||||| Sbjct 10644 CAGTCTGTGAGGTCTGCATGCATATCTATTTCTTCTGCAGTCCAAAAGGAAGCTTCTGCT 10703 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGG 93663 || || ||||||||||||| | | ||||||||| || Sbjct 10704 TTCTTATACATATCCCATACTTTTGCATATTGAATAGG 10741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556788853584640