Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq3225 111 1e-19 >seq3225 Length=28280 Score = 111 bits (122), Expect = 1e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || || || || ||||||| || || || | | Sbjct 607 ATGCAGATCTTTGTCAAGACGCTCACGGGCAAGACCATCACTCTGGATGTTGAGCCATCA 548 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | || | | ||| ||| ||||| |||||||||||||| || || || || Sbjct 547 GATACTATAGAGAACGTGAAAGCAAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAG 488 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | || ||| | | || | ||||| |||||| Sbjct 487 CAGCGTCTCATTTTCGCCGGCAAGCAGCTGGAAGATGGCAGGACACTGTCCGACTACAAC 428 Query 22399 ATTCAAAAAGAATCCACCATACAT 22422 ||||| |||||||| ||| | ||| Sbjct 427 ATTCAGAAAGAATCTACCCTTCAT 404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419675126863840