Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq114 98.7 2e-15 >seq114 Length=14821 Score = 98.7 bits (108), Expect = 2e-15 Identities = 59/62 (95%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 142057 CTGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCG 142116 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 4133 CTGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAATCCCG 4074 Query 142117 CC 142118 || Sbjct 4073 CC 4072 Score = 96.9 bits (106), Expect = 7e-15 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 142058 TGTGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3773 TGTGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 3714 Query 142118 C 142118 | Sbjct 3713 C 3713 Score = 91.5 bits (100), Expect = 3e-13 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 142061 GGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGCC 142118 ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 3585 GGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGCC 3528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027700683572576