Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3225 131 2e-25 >seq3225 Length=28280 Score = 131 bits (144), Expect = 2e-25 Identities = 157/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || ||||| | ||||| ||||| ||||||||||| ||| || ||| | | ||| ||| Sbjct 171 ACTAAATGAAGGGTAGATTCTTTCTGAATATTGTAGTCGGACAGCGTTCTACCATCTTCT 230 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||||||||||||| | || | ||||||||||| ||||| || || ||||||||| || Sbjct 231 AGCTGTTTTCCAGCGAAAATGAGACGCTGCTGATCAGGAGGAATACCTTCCTTGTCC-TG 289 Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | | | ||| || | | ||||| ||| || | ||| || || | || | || || Sbjct 290 AATCTTTGCTTTCACGTTTTCGATGGTATCTGATGGCTCAACATCCAGAGTGATGGTCTT 349 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||| |||||||| || ||||| || |||||| Sbjct 350 GCCAGTCAGAGTCTTCACAAAGATTTGCATG 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475439365296640