Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3225 125 7e-24 >seq3225 Length=28280 Score = 125 bits (138), Expect = 7e-24 Identities = 169/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 || |||||| || || || || |||||||||||||| |||||||| | || || ||| | Sbjct 611 AACAATGCAGATCTTTGTCAAGACGCTCACGGGCAAGACCATCACTCTGGATGTTGAGCC 552 Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 | || | | | |||| | |||| ||| || | ||||| ||||| || || | | Sbjct 551 ATCAGATACTATAGAGAACG-TGAAAGCAAAGATTCAGGACAAGGAGGGTATCCCTCCTG 493 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| ||||||| ||| ||||| |||||||| || | | || || ||||| Sbjct 492 ACCAGCAGCGTCTCATTTTCGCCGGCAAGCAGCTGGAAGATGGCAGGACACTGTCCGACT 433 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||| || || ||| | || || ||| |||| || || ||||||| ||| Sbjct 432 ACAACATTCAGAAAGAATCTACCCTTCATCTGGTACTCCGCCTGAGAGGTGGC 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500108177674240