Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06]
10,336 sequences; 60,415,144 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq3727 320 2e-82
seq4039 165 1e-35
seq4291 118 1e-21
>seq3727
Length=8307
Score = 320 bits (354), Expect = 2e-82
Identities = 494/699 (71%), Gaps = 7/699 (1%)
Strand=Plus/Plus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||||||||| || || || |||||||| || || || ||||| || |||||||||||
Sbjct 1104 TCGAAATCTTCTCCCCCTAAATGTGTATCTCCTGCTGTAGCTTTCACCTCAAAGATACCG 1163
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
|||| || | | ||| ||||| ||||| ||||| || |||| || ||||| |||||
Sbjct 1164 TCTTCTATAGTAAGCAAAGAAACGTCAAAAGTACCTCCCCCCATATCGAAAATAAGTACA 1223
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
||| | || | | | || ||||| | ||| || || ||||| || || || ||||||
Sbjct 1224 TTCATCTCTCCATGTCCTTTTTTATCTAAACCATAAGCAATAGCTGCTGCTGTAGGTTCA 1283
Query 7637 TTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| |||||||| || || |||||| || || ||||| | |||||||| || |||||||
Sbjct 1284 TTTATAATACGTAATAC-GTTCAGCCCCGCTATAGTACCTGCATCTTTTGTTGCTTGTCT 1342
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
||| ||||| || || || || || || || | || || || |||||| || || |
Sbjct 1343 TTGTGAATCATTGAAATATGCAGGAACTGTAATTACAGCTTCTTTGACTTCTTTTCCTAT 1402
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815
| | | ||| || || |||||||| || | | ||||| | ||| || ||||| | |
Sbjct 1403 AAAAGCTTCAGCTATCTCTTTCATCTTCATTAATACCATTGCTGATATTTCTTCTG-GGT 1461
Query 7816 AAACTGTTTCGTTT-CACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGG 7874
|| ||||| ||| || | | | | ||||| || | |||||| | | | || |
Sbjct 1462 GAAATGTTTTTTTTGTTCCTTGATAGTTTACTTCTATAAGTGGTTTACCTCCTGGTCCTG 1521
Query 7875 GGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTC 7934
| || || | | ||| | ||||||||| | || || | | || ||||||||
Sbjct 1522 CTTTCACAGTAAAAGGCCAGTGTTTCATATCTGCCTGTACAGCTGGATCGTCAAACTTTC 1581
Query 7935 TTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCT 7994
|||| || | | ||||||||||| ||||| |||| ||||| | ||| |||||| |
Sbjct 1582 TTCCTATTAATCTTTTTGCATCAAATACTGTATTTTCTGGGTTTCTTGCTACTTGGTTTT 1641
Query 7995 TCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCG 8054
| || || || || | ||| | || || || || || || || || || || || |
Sbjct 1642 TTGCTGCATCTCCTACAAGTCTCTCTGTA---TCGGTGAATGCAACATAAGAAGGTGTTG 1698
Query 8055 TTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGC 8114
||| || ||||| |||||||| || || ||||| | ||||||| ||| || || ||||
Sbjct 1699 TTCTGTTTCCTTGATCGTTCGCTATTATCTCTACACCATCGTTTTTCCATACCCCCACGC 1758
Query 8115 ACGAATACGTTGTTCCTAAATCAATACCGATTGCTTGAG 8153
| |||||||| ||||||| ||||||||| | |||| |||
Sbjct 1759 AAGAATACGTGGTTCCTAGATCAATACCAACTGCTGGAG 1797
Score = 154 bits (170), Expect = 2e-32
Identities = 553/860 (64%), Gaps = 6/860 (1%)
Strand=Plus/Plus
Query 6503 GTTCCTTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCG 6562
|||||| |||| |||||| || ||||| || ||||||| || || || || |
Sbjct 76 GTTCCTCTCATGGAATAACAATAATTTTCAAGTGCATTCTTAGCTTCTACACGTT--GTT 133
Query 6563 TACTT--TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTT 6620
|| || ||||||||| ||||||| || || || || ||||| | || || ||
Sbjct 134 TATTTGCTTCATCTTCGGCTTTATATTTCTCTGCTTCGGCTACCATTCTATCTATCTCAC 193
Query 6621 CTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCT 6680
| | || ||| ||||||||||| || || || |||| | || || || | |
Sbjct 194 CCTGACTTAGTCTACCCTTATCATTGGTGATGGTGATCTGGTTTGACTTTCCTGTATTTT 253
Query 6681 TATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTT 6740
| ||| || | ||||||| ||| ||||||||||| | |||||| | || | ||||
Sbjct 254 TTTCTGTTGCTGTAACATTCATAATGCCATTTGCATCTATATCGAAAGTAACTTCTATTT 313
Query 6741 GTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGT 6800
| ||| || || ||||| | |||||||| | || ||| | || | |||| | |
Sbjct 314 GGGGTACTCCTCTTGGTGCAGGAGGAATACCATCAAGATGAAACTTGCCTAATAAATTAT 373
Query 6801 TATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTAT 6860
|||| | | | | | ||| || || | |||| || || | |||||||| |
Sbjct 374 TATCTTTTGTCATTGCTCTTTCTCCCTCGAAAACTTGTATAAGTACACCCGGTTGATTGT 433
Query 6861 CTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAA 6920
|| |||| ||| |||||| ||| || | ||||| || |||||||| || |
Sbjct 434 CTGCATATGTTGTGAATATTTGTGATTTTTTTGTAGGAATTGTTGTATTTCTTTCTATTA 493
Query 6921 CCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGA 6980
||||| | || || ||||| || |||||||| ||||| | || || | |
Sbjct 494 ATTTCGTCATTACTCCTCCAGCTGTTTCTAGACCAAGAGAAAGAGGAGCAACATCAAGCA 553
Query 6981 GTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCG 7040
|| || ||||| || | | | | || |||| || || || || || | |
Sbjct 554 ACAAAAGATCTTGTACTTGTGAACTATTTACTCCTTTTAATATAGCTGCCTGTACAGCTG 613
Query 7041 CCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAAT 7100
| || ||||| || || ||||| || || || | | ||||||| || ||||||
Sbjct 614 CACCATATGCAACAGCTTCATCAGGATTTATAGAACGACAAGGTTCTTTTCCATTAAAAA 673
Query 7101 AATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTT 7160
| || || | |||||| || ||||| |||| ||| ||||| || ||||| || | ||
Sbjct 674 ATTCTTGTATAAGTTGTTGTATCTTCGGTATTCTTGTTGATCCTCCCACCAATACAACTT 733
Query 7161 CATTCAC-TTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATA 7219
||| || |||| ||||| || ||| ||| ||| || |||||| | |
Sbjct 734 CATGTACACTTCG-CTTATCTATACCACTATCTTTTAGTACTTTCTCTACAGGTACAAGT 792
Query 7220 CATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAG 7279
| || | ||| | |||||||| ||||| || || | ||||| | || || | ||
Sbjct 793 GAGTTTCTGAAGTAATCCATACAAAGTTCTTCGAATCTAGCACGAGAAAGAGAAACAGAG 852
Query 7280 AAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAAC 7339
|||||| || || | | ||||| ||||| || || | ||||| | ||||||
Sbjct 853 TAATCAATACCCTCAAAAAGTGAATCTATTTCTATAGTAGCTTGTGTACTACTAGATAAA 912
Query 7340 GTTCGCTTTGCGCGCTCACA 7359
|||| || || | |||||
Sbjct 913 GTTCTTTTCGCTCTTTCACA 932
>seq4039
Length=7894
Score = 165 bits (182), Expect = 1e-35
Identities = 537/827 (65%), Gaps = 8/827 (1%)
Strand=Plus/Minus
Query 6503 GTTCCTTTCATTTGATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCG 6562
|||||| |||| |||||| || ||||| || ||||||| || || || || |
Sbjct 939 GTTCCTCTCATGGAATAACAATAATTTTCAAGTGCATTCTTAGCTTCTACACGTT--GTT 882
Query 6563 TACTT--TTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTT 6620
|| || ||||||||| ||||||| || ||||| || ||||| | || || ||
Sbjct 881 TATTTGCTTCATCTTCGGCTTTATATTTCTCCGCCTCAGCAACCATTCTATCTATCTCAC 822
Query 6621 CTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCT 6680
| | || ||| ||||||||||| || || || |||| | || || || | |
Sbjct 821 CCTGACTTAGTCTACCCTTATCATTGGTGATGGTGATCTGGTTTGACTTTCCTGTATTTT 762
Query 6681 TATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTT 6740
| ||| || | ||||||| ||| ||||||||||| | |||||| | || | ||||
Sbjct 761 TTTCTGTTGCTGTAACATTCATAATGCCATTTGCATCTATATCGAAAGTAACTTCTATTT 702
Query 6741 GTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGT 6800
| ||| || || ||||| | |||||||| | || ||| | || | |||| | |
Sbjct 701 GGGGTACTCCTCTTGGTGCAGGAGGAATACCATCAAGATGAAACTTGCCTAATAAATTAT 642
Query 6801 TATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTAT 6860
|||| | | | | | ||| || || | |||| || || | |||||||| |
Sbjct 641 TATCTTTTGTCATTGCTCTTTCTCCCTCGAAAACTTGTATAAGTACACCCGGTTGATTGT 582
Query 6861 CTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAA 6920
|| |||| ||| |||||| ||| || | ||||| || |||||||| || |
Sbjct 581 CTGCATATGTTGTGAATATTTGTGATTTTTTTGTAGGAATTGTTGTATTTCTTTCTATTA 522
Query 6921 CCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGA 6980
||||| | ||| || || || || |||||||| ||||| | || || | |
Sbjct 521 ATTTCGTCATCACACCTCCTGCTGTCTCTAGACCAAGAGAAAGAGGAGCAACATCAAGCA 462
Query 6981 GTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCG 7040
|| || ||||| || | | | | || |||| || || || || || | |
Sbjct 461 ACAAAAGATCTTGTACTTGTGAACTATTTACTCCTTTTAATATAGCTGCCTGTACAGCTG 402
Query 7041 CCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAAT 7100
| || ||||| || |||||||| ||||| || | | ||||||| |||||||||
Sbjct 401 CACCATATGCAACAGCCTCATCTGGGTTTATAGAACGACATGGTTCTTTTCCGTTAAAAA 342
Query 7101 AATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTT 7160
| || || | |||||| || ||||| |||| ||| ||||| || ||||| || | ||
Sbjct 341 ATTCTTGTATAAGTTGTTGTATCTTCGGTATTCTTGTTGATCCTCCCACCAATACAACTT 282
Query 7161 CATTCAC-TTTCGATTTATCGAT-CTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCAT 7218
||| || |||| ||||| || | | || || | ||| || |||||| | |
Sbjct 281 CATGTACACTTCG-CTTATCTATACCACTATCCTTCAA-TACTTTCTCTACAGGTACAAG 224
Query 7219 ACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATA 7278
| || | ||| | |||||||| ||||| || || | ||||| | || || | |
Sbjct 223 TGAATTTCTGAAGTAATCCATACAAAGTTCTTCGAATCTAGCACGAGAAAGAGAAACAGA 164
Query 7279 GAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTG 7325
| |||||| || || | | ||||| ||||| || || | |||||
Sbjct 163 GTAATCAATACCCTCAAAAAGTGAATCTATTTCTATAGTAGCTTGTG 117
>seq4291
Length=7478
Score = 118 bits (130), Expect = 1e-21
Identities = 199/284 (70%), Gaps = 8/284 (3%)
Strand=Plus/Plus
Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594
|| ||||| || ||||||||||| || || ||| |||| | || | || |||
Sbjct 4077 GACACATCGAAGGTACCACCACCAAGATCGTAAACAAGTA---TAGTTTTTTCATCT--- 4130
Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654
|| || || ||||| || || ||||| || || || |||||||| || || |||| |
Sbjct 4131 TTTTTGTCTAGACCATAAGCAATAGCAGCAGCAGTGGGTTCATTGATGATCCGAATAACA 4190
Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714
|| || || ||||||| | | |||||||| || ||||| || || | ||| ||||||||
Sbjct 4191 TTAAGACCTGCAATAGCTCCTGCATCTTTTGTAGCTTGACGCTGAGCATCATTAAAGTAT 4250
Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774
|| || || || || || || | | | |||| | || ||||| ||| || | |||
Sbjct 4251 GCAGGTACAGTAACAACAGCATTCTTTACTTCTCTCCCTAGATAGTTTTCTGCTACTTCT 4310
Query 7775 TTCAT-TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817
||||| ||| ||| ||||| | ||||| ||| || | ||||
Sbjct 4311 TTCATCTTTCCTAA-TACCATAGCTGAAACCTCCTCGGGAGCAA 4353
Score = 104 bits (114), Expect = 3e-17
Identities = 185/270 (69%), Gaps = 0/270 (0%)
Strand=Plus/Plus
Query 6565 CTTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTT 6624
|||| |||||||||| | | || || || ||||| | ||| |||| || || ||
Sbjct 1404 CTTTCTATCTTCATCTGCAAATTTCTCTGCTTCTTGTATCATTCTTTCTATCTCATCAGG 1463
Query 6625 CGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATC 6684
| |||||| || |||||||| || || |||||||| ||| || || | | |||||
Sbjct 1464 TGTTAATCTACCTTTATCATTTGTTATAGTAATCTTCTCGCTCTTTCCTGTTCCTTTATC 1523
Query 6685 TTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGG 6744
| ||||||| ||||| || ||||| ||| ||| || || || | |||| || || ||
Sbjct 1524 TACAGCACTCACATTTAATATACCGTTTCTATCCACGTCAAATGTAACATCTATCTGAGG 1583
Query 6745 TGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATC 6804
||| | || || | ||||||||||| || ||||| | || | | | ||| |
Sbjct 1584 CACACCACGAGGAGCTGGAGGAATACCCGTCAATTCAAACTTCCCCAAAAGATGGTTGTT 1643
Query 6805 CGTCGCCTTCTTACGTTCACCTTCATAGAC 6834
| ||| | || || |||||||| || ||
Sbjct 1644 CTTCGTCATCGGGCGCTCACCTTCGTACAC 1673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635050740842240
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