Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3225 136 9e-27 >seq3225 Length=28280 Score = 136 bits (150), Expect = 9e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 ||||| || || ||||| ||||||||||| |||| || ||||| |||||||| ||||| Sbjct 177 TGAAGGGTAGATTCTTTCTGAATATTGTAGTCGGACAGCGTTCTACCATCTTCTAGCTGT 236 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||| || || || || || || |||||||| ||||| ||||| ||||| ||| Sbjct 237 TTTCCAGCGAAAATGAGACGCTGCTGATCAGGAGGAATACCTTCCTTGTCCTGAATCTTT 296 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 || ||||| || ||||| || || || || || || || | ||||| || ||| Sbjct 297 GCTTTCACGTTTTCGATGGTATCTGATGGCTCAACATCCAGAGTGATGGTCTTGCCAGTC 356 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | ||| || || || | |||||| Sbjct 357 AGAGTCTTCACAAAGATTTGCAT 379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109334671351712