Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq3225 122 6e-23 >seq3225 Length=28280 Score = 122 bits (134), Expect = 6e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||||||||| ||||| || || | | |||| |||||||| || ||||| || Sbjct 416 TTCTTTCTGAATGTTGTAGTCGGACAGTGTCCTGCCATCTTCCAGCTGCTTGCCGGCGAA 475 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | ||||||||||| |||||| ||| ||| Sbjct 476 AATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATCTTTGCTTTCACGTT 535 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 |||| | || | ||||||||| | || ||||| || |||||||| ||||| || Sbjct 536 CTCTATAGTATCTGATGGCTCAACATCCAGAGTGATGGTCTTGCCCGTGAGCGTCTTGAC 595 Query 34970 AAAGATCTGCAT 34981 |||||||||||| Sbjct 596 AAAGATCTGCAT 607 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||| || |||| || |||||||||||| || ||||| || || ||| |||| || Sbjct 170 AACTAAATGAAGGGTAGATTCTTTCTGAATATTGTAGTCGGACAGCGTTCTACCATCTTC 229 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||||||||| || || || || || ||||| || | || | || |||||||| Sbjct 230 TAGCTGTTTTCCAGCGAAAATGAGACGCTGCTGATCAGGAGGAATACCTTCCTTGTCCTG 289 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| ||| ||| | | || | || | ||||||||| | || ||||| || Sbjct 290 AATCTTTGCTTTCACGTTTTCGATGGTATCTGATGGCTCAACATCCAGAGTGATGGTCTT 349 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || ||||||||||||||||| ||||| Sbjct 350 GCCAGTCAGAGTCTTCACAAAGATTTGCAT 379 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324592705905408