Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq3103 165 4e-36 >seq3103 Length=10288 Score = 165 bits (182), Expect = 4e-36 Identities = 153/194 (79%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 25925 ACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATT 25984 ||| ||||||| || | || |||||||| | ||| ||| | |||||| ||||||||| Sbjct 4002 ACTCTCTCCATGAAGAGGTCAGGAATCCAAAGAGCAGGAAAGAGATCTCTGGCTCTCATT 4061 Query 25985 TCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGT 26044 |||||||| |||||||| ||| | | |||||| || ||||| ||||||| |||||||| Sbjct 4062 TCTTCTTTCCCGTGATTTTTTCTAATATCTAAAAACTCAAATATATCTGCATGCCATGGC 4121 Query 26045 TCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCA 26104 |||| ||| | |||| |||||| ||||| |||||||| |||||||||||||| | | | Sbjct 4122 TCTACATACACCGCAAGACTACCCTTTCTCTTTCCTCCTCCTTGATCTACGTAGCGAGAA 4181 Query 26105 GTTTCATTGAAAAC 26118 | || ||||| || Sbjct 4182 GCGTCGTTGAATAC 4195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253008124551200