Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq4353 91.5 4e-13 >seq4353 Length=7185 Score = 91.5 bits (100), Expect = 4e-13 Identities = 95/124 (77%), Gaps = 3/124 (2%) Strand=Plus/Minus Query 301828 CGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAAGTGGAAAGTATTC 301887 ||||||||||| | || || || ||| || |||||||||||||||| || ||||| Sbjct 6302 CGGGGAACACCGAGAGTAACATT---CTTAGAACCAACACCAGCAAAGTGAAATGTATTT 6246 Query 301888 AGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCATACCAACCATTTCT 301947 ||||| | ||| || | ||||||||||||| ||| || ||||| |||||| |||| Sbjct 6245 AGAGTCATTTGTGTTGCTGGCTCACCAATAGATTGAGCAGCAATAGCACCAACACATTCT 6186 Query 301948 CCTG 301951 |||| Sbjct 6185 CCTG 6182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471622687195232