Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq4353 102 2e-16 >seq4353 Length=7185 Score = 102 bits (112), Expect = 2e-16 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 305323 TGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAA 305382 ||||| || | || ||||||||||| || | |||||||||||||| |||| |||| Sbjct 804 TGATTATGTATTATTTAATAGGCAACCTTCTTTACATAAAATGTCTATTATGGGTCATCG 863 Query 305383 AGTCAAAGTATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAA 305442 || || ||| || | ||||| ||| ||||| || || | | | |||||||| Sbjct 864 TGTTCGTGTTTTACCTTATTCTACATTCCGACTAAATTTATCTGTTACTTCTCCTTATAA 923 Query 305443 TGCGGATTTTGATGGAGATGAAATGAATATGCAT 305476 ||| |||||||||||||||||||||||| | ||| Sbjct 924 TGCTGATTTTGATGGAGATGAAATGAATCTACAT 957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186655630380896