Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3225 120 3e-22 >seq3225 Length=28280 Score = 120 bits (132), Expect = 3e-22 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 ||||||| | ||||| || || | || || || | ||||| | || || || |||| Sbjct 380 CATGCAAATCTTTGTGAAGACTCTGACTGGCAAGACCATCACTCTGGATGTTGA-GCCAT 322 Query 25234 C-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATC 25292 | ||||| ||||| | || ||| ||| ||| || || || ||||| || || |||| Sbjct 321 CAGATACCATCGAAAACGTGAAAGCAAAGATTCAGGACAAGGAAGGTATTCCTCCTGATC 262 Query 25293 AGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAA--TGTCAGCGATTA 25350 |||| | ||||||| || || ||||| || ||||||| ||||| |||| ||| || Sbjct 261 AGCAGCGTCTCATTTTCGCTGGAAAACAGCTAGAAGATGGTAGAACGCTGTC--CGACTA 204 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||||||| |||||||| ||| |||||||||| | | ||||||| || Sbjct 203 CAATATTCAGAAAGAATCTACCCTTCATTTAGTTCTTCGCCTGAGAGGTGG 153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445036893803520