Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq3225 87.8 1e-12 >seq3225 Length=28280 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/234 (69%), Gaps = 3/234 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| ||||| || || | |||| ||| || || || || |||||||| || || || Sbjct 380 GCCACCTCTCAGGCGGAGTACCAGATGAAGGGTAGATTCTTTCTGAATGTTGTAGTCGGA 439 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||||| | | ||||| || || || ||||| || || | |||||| ||||| || || Sbjct 440 CAGTGTCCTGCCATCTTCCAGCTGCTTGCCGGCGAAAATGAGACGCTGCTGGTCAGGAGG 499 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| ||| |||| ||| ||| | || || ||| ||| | Sbjct 500 GATACCCTCCTTGTC-CTGAATCTTTGCTTTCACGTTCTCTATAGTATCTGATGGCTCAA 558 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCA-TGTTG 34710 | |||| || || || || || || | ||| || ||||| ||||||| ||||| Sbjct 559 CATCCAGAGTGATGGTCTTGCCCGTGAGCGTCTTGACAAAGATCTGCATTGTTG 612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314689953512288