Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20mitis_20[genbank_20GCA_5F000499745.1_202013-11-06] 10,336 sequences; 60,415,144 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq3225 127 2e-24 >seq3225 Length=28280 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || || || |||||| | || ||||| || || || || || Sbjct 607 ATGCAGATCTTTGTCAAGACGCTCACGGGCAAGACCATCACTCTGGATGTTGAGCCATCA 548 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || |||| || ||| ||| ||||| ||||| || || || || || || || Sbjct 547 GATACTATAGAGAACGTGAAAGCAAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAG 488 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | ||||||||| || ||||||| | ||| | ||||| |||||| Sbjct 487 CAGCGTCTCATTTTCGCCGGCAAGCAGCTGGAAGATGGCAGGACACTGTCCGACTACAAC 428 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| || || || ||| | ||| |||| | || || | |||||||| Sbjct 427 ATTCAGAAAGAATCTACCCTTCATCTGGTACTCCGCCTGAGAGGTGGCAT 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434862208542720