Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20necatrix_20[genbank_20GCA_5F000499385.1_202013-11-06] 3,707 sequences; 55,007,932 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3447 91.5 3e-13 seq3021 91.5 3e-13 >seq3447 Length=249472 Score = 91.5 bits (100), Expect = 3e-13 Identities = 58/62 (94%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 142058 TGTGGCGCAAT-GGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCG 142116 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 168434 TGTGGCGCAATCGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCG 168375 Query 142117 CC 142118 || Sbjct 168374 CC 168373 >seq3021 Length=169204 Score = 91.5 bits (100), Expect = 3e-13 Identities = 58/62 (94%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 142058 TGTGGCGCAAT-GGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCG 142116 ||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 3293 TGTGGCGCAATCGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCG 3352 Query 142117 CC 142118 || Sbjct 3353 CC 3354 Score = 91.5 bits (100), Expect = 3e-13 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 142060 TGGCGCAATGGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCCGC 142117 |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3836 TGGCGCAATGGATAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAGTCCCGC 3893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027787981927587