Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20necatrix_20[genbank_20GCA_5F000499385.1_202013-11-06] 3,707 sequences; 55,007,932 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq550 87.8 2e-11 >seq550 Length=33001 Score = 87.8 bits (96), Expect = 2e-11 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 869741 CTGGCGGCGAAAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGAC 869800 ||||||||||| || ||||||||||| ||||| ||||| |||||| | | | | Sbjct 70 CTGGCGGCGAAGAAGGCCAGGACGTGTTTGATGAAGTGCTGCTCGTTGGAGTCCAAAGTG 129 Query 869801 ACCCAGTGGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCG 869860 |||||| | | |||||| || | ||| | || |||| |||||| | || || ||| Sbjct 130 GCCCAGTCGGCCAAGTCGGCACTCATGTCGATTTCTTCGGTGGTCCAAAAAGAAGCTTCG 189 Query 869861 GCCTTTTTGTACATCTCCCATACTTGCTGGT 869891 || ||||||||||| | ||| |||| |||| Sbjct 190 GCTTTTTTGTACATGTTCCACACTTCGTGGT 220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106834986220119