Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20necatrix_20[genbank_20GCA_5F000499385.1_202013-11-06] 3,707 sequences; 55,007,932 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq3418 82.4 6e-11 >seq3418 Length=21158 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || ||||| || ||| | || || || ||||| || |||| |||||| Sbjct 437 AATGCAGATCTTTGTGAAGACTCTTACAGGGAAGACCATCACTCTCGATGTGGAGCCGTC 378 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || ||| | || || |||||| ||||| || ||| | || ||||| Sbjct 377 AGACACCATCGAGAATGTGAAGGCAAAGATTCAGGACAAGGAGGGCATTCCTCCTGATCA 318 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | || || | || || || ||||||||||| | || || || | |||||||| Sbjct 317 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGAAGGACGCTGTCTGATTACAA 258 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||| ||||| ||||| | ||| ||||| | | ||| |||| || Sbjct 257 CATTCAGAAAGAGTCTACCCTTCACTTGGTGCTGCGCCTGAGAGGTGG 210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412822948203551