Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq207 104 2e-17 >seq207 Length=10688 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||||| ||||| | ||||||||||| || || | || || || | Sbjct 10192 AAAATGCAAATCTTCGTGAAAACCTTGACGGGCAAAACGATTACTCTGGATGTGGAGCCT 10133 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | ||| | || | ||||||| ||||||||||| || ||| | || Sbjct 10132 TCCGACACGATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATTCCCCCTGAT 10073 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| || | || | || ||||| |||||||| || | | || || |||||| Sbjct 10072 CAGCAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGCAGGACGCTGTCTGACTAC 10013 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| ||| ||| || || || || Sbjct 10012 AACATCCAGAAAGAGAGCACTCTTCACCTTGT 9981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515005731804960