Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq207 96.9 3e-15 >seq207 Length=10688 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || || || |||||||| || ||||||||||| || | ||||| || | | Sbjct 10189 ATGCAAATCTTCGTGAAAACCTTGACGGGCAAAACGATTACTCTGGATGTGGAGCCTTCC 10130 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | |||| ||| || | |||||| | ||||| || | || ||| ||| Sbjct 10129 GACACGATCGAAAATGTGAAAGCCAAAATTCAAGACAAAGAGGGAATTCCCCCTGATCAG 10070 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||||| || | ||| ||||| || ||||| ||| || ||| || || |||| | Sbjct 10069 CAGCGTTTGATTTTTGCTGGCAAGCAGCTGGAGGATGGCAGGACGCTGTCTGACTACAAC 10010 Query 25012 ATACAGAAAGAGGCCACGCTTCA 25034 || ||||||||| ||| ||||| Sbjct 10009 ATCCAGAAAGAGAGCACTCTTCA 9987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418135019040320