Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq207 87.8 1e-12 >seq207 Length=10688 Score = 87.8 bits (96), Expect = 1e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 42912 AGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCC 42971 ||||||||| || || | ||||| || |||| || | | || |||| || ||||| Sbjct 9992 AGTGCTCTCTTTCTGGATGTTGTAGTCAGACAGCGTCCTGCCATCCTCCAGCTGCTTGCC 10051 Query 42972 GGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTT 43031 ||||||||||| ||||| ||||| | || | || ||||| || || |||| Sbjct 10052 AGCAAAAATCAAACGCTGCTGATCAGGGGGAATTCCCTCTTTGTCTTGAATTTTGGCTTT 10111 Query 43032 GACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGT 43091 || | | | |||||| || ||| || || | || || ||||| || || | || Sbjct 10112 CACATTTTCGATCGTGTCGGAAGGCTCCACATCCAGAGTAATCGTTTTGCCCGTCAAGGT 10171 Query 43092 TTTCACAAAAATTTGCATTTTCTTAATTTTATTTGTACACT 43132 |||||| || ||||||||||||| || | ||||| || || Sbjct 10172 TTTCACGAAGATTTGCATTTTCTAAAATCAATTTGCACTCT 10212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381215539314468