Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq207 82.4 6e-11 >seq207 Length=10688 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/202 (69%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 20018 TCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAA 20077 ||||| || |||||||| || || || | ||| |||| || ||||| ||| || Sbjct 9999 TCTTTCTGGATGTTGTAGTCAGACAGCGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAA 10058 Query 20078 ATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGG 20137 || | | ||| ||||| ||| | || |||||||| |||||| |||||| | Sbjct 10059 ATCAAACGCTGCTGATCAGGGGGAATTCCCTCTTTGTCTTGAATTTTGGCTTTCACATTT 10118 Query 20138 CCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACA 20197 | | | ||| ||| ||| |||| ||||| |||||||| ||||| ||||| || Sbjct 10119 TCGATCGTGTCGGAAGGCTCCACATCCAGAGTAATCGTTTTGCCCGTCAAGGTTTTCACG 10178 Query 20198 AAAATTTGCATTTT-TAAACTC 20218 || ||||||||||| |||| || Sbjct 10179 AAGATTTGCATTTTCTAAAATC 10200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419417700670026