Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq207 134 3e-26 >seq207 Length=10688 Score = 134 bits (148), Expect = 3e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 |||||||| || || |||||||| || || || || || || || || || ||||||||| Sbjct 9999 TCTTTCTGGATGTTGTAGTCAGACAGCGTCCTGCCATCCTCCAGCTGCTTGCCAGCAAAA 10058 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || | | ||| |||||||| || ||||| ||||| || ||||| || ||||| |||||| Sbjct 10059 ATCAAACGCTGCTGATCAGGGGGAATTCCCTCTTTGTCTTGAATTTTGGCTTTCACATTT 10118 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | || ||| ||| || || || || ||||| || || || || | ||||| || Sbjct 10119 TCGATCGTGTCGGAAGGCTCCACATCCAGAGTAATCGTTTTGCCCGTCAAGGTTTTCACG 10178 Query 104549 AATATCTGCATTTT 104562 || || |||||||| Sbjct 10179 AAGATTTGCATTTT 10192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150909420529368