Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20nieschulzi_20[genbank_20GCA_5F000826945.1_202015-01-21] 33,146 sequences; 62,832,469 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq207 84.2 2e-11 >seq207 Length=10688 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/219 (69%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 16725 GTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCT 16784 |||| | || || ||| ||| || || ||||||||||| | || || || | |||| Sbjct 9979 GTACAAGGTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCAGACAGCGTCCTGCCATCCT 10038 Query 16785 CCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGG 16844 ||| || ||||| ||| |||| | ||||| || || || | ||||||||||| Sbjct 10039 CCAGCTGCTTGCCAGCAAAAATCAAACGCTGCTGATCAGGGGGAATTCCCTCTTTGTCTT 10098 Query 16845 CAATTT--GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 ||||| ||| ||||| | | | |||||| |||||| |||| || || || Sbjct 10099 GAATTTTGGCT--TTCACATTTTCGATCGTGTCGGAAGGCTCCACATCCAGAGTAATCGT 10156 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTA 16941 ||| || |||| ||||| || || || |||||||| || Sbjct 10157 TTTGCCCGTCAAGGTTTTCACGAAGATTTGCATTTTCTA 10195 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404924357866540